RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 PRB1P04280 392 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 ITIH1P19827 911 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 CDK18Q07002 472 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 CLN3Q13286 438 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 PEX6Q13608 980 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 TFDP2Q14188 446 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 TAZQ16635 292 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 ZNF648Q5T619 568 aaPredicted RBP11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 HENMT1Q5T8I9 393 aaKnown RBP11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 ALS2CLQ60I27 953 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 SARM1Q6SZW1 724 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 SPOCD1Q6ZMY3 1216 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 ZNF574Q6ZN55 896 aaPredicted RBP11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 CHST15Q7LFX5 561 aaPredicted RBP11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 SLITRK4Q8IW52 837 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 RAVER1Q8IY67 606 aaKnown RBP11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 SLC39A7Q92504 469 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 TADA1Q96BN2 335 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 NUDT22Q9BRQ3 303 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 ANP32EQ9BTT0 268 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 ZFYVE1Q9HBF4 777 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 GLOD4Q9HC38 313 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 ARFGAP3Q9NP61 516 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 UBP1Q9NZI7 540 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 PCDHGA7Q9Y5G6 932 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 PCDHA13Q9Y5I0 950 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 SHROOM3Q8TF72 1996 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 BAHCC1Q9P281 2608 aa11.84□□□□□ -0.51
CCHCR1-215ENST00000488920 SMG1Q96Q15 3661 aaKnown RBP11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 ZW10O43264 779 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 PMPCBO75439 489 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 PECAM1P16284 738 aaPredicted RBP11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 MPSTP25325 297 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 PTPN3P26045 913 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 ETV5P41161 510 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 GPR3P46089 330 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 NR2C2P49116 596 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 ADCY2Q08462 1091 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 VAC14Q08AM6 782 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 LRP8Q14114 963 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 NR1D2Q14995 579 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 C16orf72Q14CZ0 275 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 PRKD1Q15139 912 aaPredicted RBP11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 TGIF1Q15583 401 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 TEX44Q53QW1 395 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 BZW1Q7L1Q6 419 aaKnown RBP11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 TMC3Q7Z5M5 1100 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 ZNF761Q86XN6 746 aaPredicted RBP11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 GPR26Q8NDV2 337 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 TFB1MQ8WVM0 346 aaKnown RBP11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 USP7Q93009 1102 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 TMEM159Q96B96 161 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 TEKT5Q96M29 485 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 CMKLR1Q99788 373 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 SPATA16Q9BXB7 569 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 GPR63Q9BZJ6 419 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 MAGEE1Q9HCI5 957 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 KCNK4Q9NYG8 393 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 VPS18Q9P253 973 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 TBC1D29Q9UFV1 150 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 KCNK6Q9Y257 313 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 SSUH2Q9Y2M2 353 aa11.83□□□□□ -0.52
CCHCR1-215ENST00000488920 IGHV1OR21-1A0A087WYE8 117 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 A0A0A6YYK5 440 aaPredicted RBP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 PRAMEF33A0A0G2JMD5 474 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 IGHV5-10-1A0A0J9YXX1 117 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 F5H423 210 aaPredicted RBP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 AURKAO14965 403 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 NVLO15381 856 aaKnown RBP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 PSTPIP1O43586 416 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 SNX2O60749 519 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 PRAMEF10O60809 474 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 ZRANB2O95218 330 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 SLC25A14O95258 325 aaPredicted RBP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 LCA5LO95447 670 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 NDST3O95803 873 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 CCL4P13236 92 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 ACP5P13686 325 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 ZNF8P17098 575 aaPredicted RBP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 CD68P34810 354 aaPredicted RBP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 MARCKSL1P49006 195 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 PPM1FP49593 454 aaPredicted RBP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 MAPK10P53779 464 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 HADHBP55084 474 aaKnown RBP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 CFHR1Q03591 330 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 WASHC5Q12768 1159 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 SPA17Q15506 151 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 CCDC70Q6NSX1 233 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 ZC3H18Q86VM9 953 aaKnown RBP11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 RCOR2Q8IZ40 523 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 RCBTB1Q8NDN9 531 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 SLC37A2Q8TED4 501 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 P3H4Q92791 437 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 HAUS1Q96CS2 278 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 CCDC74BQ96LY2 380 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 HEMGNQ9BXL5 484 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 OR2AG1Q9H205 316 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 RMI1Q9H9A7 625 aa11.82□□□□□ -0.52
CCHCR1-215ENST00000488920 ATXN10Q9UBB4 475 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms