RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CSNK2A3Q8NEV1 391 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 HUS1BQ8NHY5 278 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 SPPL3Q8TCT6 385 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 ORAI1Q96D31 301 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 C8orf48Q96LL4 319 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 PKP2Q99959 881 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 FGFBP2Q9BYJ0 223 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 WDR12Q9GZL7 423 aaKnown RBP2.4□□□□□ -2.03
CCDC93-209ENST00000488908 KIAA1456Q9P272 454 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 PEMTQ9UBM1 199 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 KLK13Q9UKR3 277 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 FAM96BQ9Y3D0 163 aa2.4□□□□□ -2.03
CCDC93-209ENST00000488908 LSM4Q9Y4Z0 139 aaKnown RBP2.4□□□□□ -2.03
CCDC93-209ENST00000488908 PEX12O00623 359 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 SPINT2O43291 252 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 ZFAND5O76080 213 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 EML2O95834 649 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 TK1P04183 234 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 FAM157CP0CG43 387 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 TRIM49P0CI25 452 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 TRIM49CP0CI26 452 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 GNAZP19086 355 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 CEACAM8P31997 349 aaPredicted RBP2.39□□□□□ -2.03
CCDC93-209ENST00000488908 PTGER3P43115 390 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 TAS2R38P59533 333 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 SNRPD1P62314 119 aaKnown RBP2.39□□□□□ -2.03
CCDC93-209ENST00000488908 ACVR2BQ13705 512 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 XRRA1Q6P2D8 792 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 PIWIL4Q7Z3Z4 852 aaKnown RBP2.39□□□□□ -2.03
CCDC93-209ENST00000488908 TADA2BQ86TJ2 420 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 ADIPOR2Q86V24 386 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 C11orf53Q8IXP5 236 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 TMEM57Q8N5G2 664 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 EIF2AK1Q9BQI3 630 aaKnown RBP2.39□□□□□ -2.03
CCDC93-209ENST00000488908 MROH8Q9H579 483 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 IL1RAPL1Q9NZN1 696 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 DLGAP2Q9P1A6 1054 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 ERVK-11Q9UQG0 969 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 DNAJC16Q9Y2G8 782 aa2.39□□□□□ -2.03
CCDC93-209ENST00000488908 KLLNB2CW77 178 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 TEX22C9J3V5 150 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 TMEM178BH3BS89 294 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 PI15O43692 258 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 KRTAP5-8O75690 187 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 CSTBP04080 98 aaKnown RBP2.38□□□□□ -2.03
CCDC93-209ENST00000488908 HEXAP06865 529 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 TPOP07202 933 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 ITGA3P26006 1051 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 SHMT1P34896 483 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 SLC6A12P48065 614 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 HIST2H2ACQ16777 129 aaPredicted RBP2.38□□□□□ -2.03
CCDC93-209ENST00000488908 ZNF280DQ6N043 979 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 ZNF343Q6P1L6 599 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 MAP7D3Q8IWC1 876 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 CACNA2D3Q8IZS8 1091 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 SCML4Q8N228 414 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 ACVR1CQ8NER5 493 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 HMGCLL1Q8TB92 370 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 PSD2Q9BQI7 771 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 LRMDAQ9H2I8 198 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 SIX2Q9NPC8 291 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 TCP11L1Q9NUJ3 509 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 PLCXD1Q9NUJ7 323 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 KLHL20Q9Y2M5 609 aa2.38□□□□□ -2.03
CCDC93-209ENST00000488908 RRP7AQ9Y3A4 280 aaKnown RBP2.38□□□□□ -2.03
CCDC93-209ENST00000488908 IPO5O00410 1097 aaKnown RBP2.37□□□□□ -2.03
CCDC93-209ENST00000488908 FAM155BO75949 473 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 HMBSP08397 361 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 MSH3P20585 1137 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 ELF1P32519 619 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 ADD2P35612 726 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 ACTR2P61160 394 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 SORDQ00796 357 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 MBTD1Q05BQ5 628 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 PWWP2BQ6NUJ5 590 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 DHX40Q8IX18 779 aaKnown RBP2.37□□□□□ -2.03
CCDC93-209ENST00000488908 LTV1Q96GA3 475 aaPredicted RBP2.37□□□□□ -2.03
CCDC93-209ENST00000488908 GRAMD2BQ96HH9 432 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 ZSCAN31Q96LW9 406 aaPredicted RBP2.37□□□□□ -2.03
CCDC93-209ENST00000488908 ELAC2Q9BQ52 826 aaKnown RBP2.37□□□□□ -2.03
CCDC93-209ENST00000488908 FAM110AQ9BQ89 295 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 PIGQQ9BRB3 760 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 VEZTQ9HBM0 779 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 FBXL2Q9UKC9 423 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 PADI3Q9ULW8 664 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.37□□□□□ -2.03
CCDC93-209ENST00000488908 MOB4Q9Y3A3 225 aa2.37□□□□□ -2.03
CCDC93-209ENST00000488908 IGLV3-10A0A075B6K4 115 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 OR5K3A6NET4 321 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 H0YIN7 160 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 MOCS3O95396 460 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 DUX4L4P0CJ87 422 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 MCCP23508 829 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 NR2F2P24468 414 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 NFKBIAP25963 317 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 COG7P83436 770 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 NAE1Q13564 534 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 BLMHQ13867 455 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 PPP2R5BQ15173 497 aa2.36□□□□□ -2.03
CCDC93-209ENST00000488908 MYLK3Q32MK0 819 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms