RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 DNAJC6O75061 913 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 PPFIA2O75334 1257 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 CLDN7O95471 211 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 FAM228BP0C875 321 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 LIFP15018 202 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 CCNCP24863 283 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 PBX1P40424 430 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 TSPAN7P41732 249 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 PPM1FP49593 454 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-231ENST00000488905 CSRP3P50461 194 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 RAB15P59190 212 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 RPL26P61254 145 aaKnown RBP18.27■□□□□ 0.52
HDAC6-231ENST00000488905 HHEXQ03014 270 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 CLCA4Q14CN2 919 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 ANKRD20A8PQ5CZ79 823 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-231ENST00000488905 HENMT1Q5T8I9 393 aaKnown RBP18.27■□□□□ 0.52
HDAC6-231ENST00000488905 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.52
HDAC6-231ENST00000488905 ARRDC2Q8TBH0 407 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 ZNF564Q8TBZ8 553 aaPredicted RBP18.27■□□□□ 0.52
HDAC6-231ENST00000488905 TSGA13Q96PP4 275 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 ASPSCR1Q9BZE9 553 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 STN1Q9H668 368 aaKnown RBP18.27■□□□□ 0.52
HDAC6-231ENST00000488905 PCDH9Q9HC56 1237 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 OCIAD1Q9NX40 245 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 SLC39A1Q9NY26 324 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 PDP2Q9P2J9 529 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 RPL26L1Q9UNX3 145 aaKnown RBP18.27■□□□□ 0.52
HDAC6-231ENST00000488905 RELNP78509 3460 aa18.27■□□□□ 0.52
HDAC6-231ENST00000488905 FLNCQ14315 2725 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 TRBV23OR9-2A0A075B6M9 112 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 TERTO14746 1132 aaKnown RBP18.26■□□□□ 0.51
HDAC6-231ENST00000488905 ATP1A1P05023 1023 aaKnown RBP18.26■□□□□ 0.51
HDAC6-231ENST00000488905 ZBED6P86452 979 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 NIPAL4Q0D2K0 466 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 ATP13A4Q4VNC1 1196 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 DCAF12Q5T6F0 453 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 ALKBH5Q6P6C2 394 aaKnown RBP18.26■□□□□ 0.51
HDAC6-231ENST00000488905 ATG14Q6ZNE5 492 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 CPNE8Q86YQ8 564 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 BMPERQ8N8U9 685 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 FAF2Q96CS3 445 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 WDR24Q96S15 920 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 SARS2Q9NP81 518 aaKnown RBP18.26■□□□□ 0.51
HDAC6-231ENST00000488905 GEMIN8Q9NWZ8 242 aaKnown RBP18.26■□□□□ 0.51
HDAC6-231ENST00000488905 ZNHIT2Q9UHR6 403 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 PRKAB1Q9Y478 270 aa18.26■□□□□ 0.51
HDAC6-231ENST00000488905 FADS2P1A8MWK0 482 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 RAD1O60671 282 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 ACP5P13686 325 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 MX2P20592 715 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 SPINT3P49223 89 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 GBE1Q04446 702 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 PDK2Q15119 407 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 NFKBIBQ15653 356 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 ANKS6Q68DC2 871 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 BORAQ6PGQ7 559 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 WDR74Q6RFH5 385 aaPredicted RBP18.25■□□□□ 0.51
HDAC6-231ENST00000488905 CHST15Q7LFX5 561 aaPredicted RBP18.25■□□□□ 0.51
HDAC6-231ENST00000488905 CACNA2D3Q8IZS8 1091 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 KCTD6Q8NC69 237 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 LRRN4Q8WUT4 740 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 HDAC11Q96DB2 347 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 TEFMQ96QE5 360 aaKnown RBP18.25■□□□□ 0.51
HDAC6-231ENST00000488905 HERPUD2Q9BSE4 406 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 SLC25A18Q9H1K4 315 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 PKD2L2Q9NZM6 624 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 TBC1D29Q9UFV1 150 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 CNOT6Q9ULM6 557 aaKnown RBP18.25■□□□□ 0.51
HDAC6-231ENST00000488905 KCNK6Q9Y257 313 aa18.25■□□□□ 0.51
HDAC6-231ENST00000488905 A6NCN8 305 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 SUV39H1O43463 412 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 PROSCO94903 275 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 SLC2A4P14672 509 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 FANCCQ00597 558 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 NFATC2Q13469 925 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 QPCTQ16769 361 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 SNAP47Q5SQN1 464 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 PQLC3Q8N755 202 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 COL26A1Q96A83 441 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 IQCDQ96DY2 449 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 ADNPQ9H2P0 1102 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 RMI1Q9H9A7 625 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 IL17BQ9UHF5 180 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 PILRAQ9UKJ1 303 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 CAPN11Q9UMQ6 739 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 NENFQ9UMX5 172 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 DOPEY2Q9Y3R5 2298 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 NBASA2RRP1 2371 aa18.24■□□□□ 0.51
HDAC6-231ENST00000488905 A8MU76 341 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 MMP2P08253 660 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 KRT7P08729 469 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 F3P13726 295 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 CD86P42081 329 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 EPHA4P54764 986 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 TAS2R40P59535 323 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 TPM4P67936 248 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 IYDQ6PHW0 289 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 LYSMD3Q7Z3D4 306 aa18.23■□□□□ 0.51
HDAC6-231ENST00000488905 ARHGAP22Q7Z5H3 698 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms