RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 SLC13A5Q86YT5 568 aaPredicted RBP15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 TRAM1L1Q8N609 369 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 PDCD7Q8N8D1 485 aaKnown RBP15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 MAPK15Q8TD08 544 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 ATG4AQ8WYN0 398 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 TMEM121Q9BTD3 319 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 ZSCAN5AQ9BUG6 496 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 FICDQ9BVA6 458 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 SPATA16Q9BXB7 569 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 TLR10Q9BXR5 811 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 GSDMCQ9BYG8 508 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 BPIFA1Q9NP55 256 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 RAD18Q9NS91 495 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 IL17CQ9P0M4 197 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 TAAR2Q9P1P5 351 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 IGF2RP11717 2491 aa15.82■□□□□ 0.12
CTDSP1-209ENST00000488627 ZNF189O75820 626 aaPredicted RBP15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 METTL18O95568 372 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 SLC4A1P02730 911 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 ILF3Q12906 894 aaKnown RBP eCLIP15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 HLTFQ14527 1009 aaKnown RBP eCLIP15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 OASLQ15646 514 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 PARP6Q2NL67 630 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 KCTD11Q693B1 232 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 PDPK2PQ6A1A2 396 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 MARK2Q7KZI7 788 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 DTX3LQ8TDB6 740 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 RTP4Q96DX8 246 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 PLEKHG4BQ96PX9 1271 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 OR2M4Q96R27 311 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 APOL2Q9BQE5 337 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 CCDC3Q9BQI4 270 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 FSD1LQ9BXM9 530 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 ABCG4Q9H172 646 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 CARD9Q9H257 536 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 DPEP2Q9H4A9 486 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 IL26Q9NPH9 171 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 HACD3Q9P035 362 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 ATXN10Q9UBB4 475 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 DKK4Q9UBT3 224 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 ZMIZ1Q9ULJ6 1067 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 AAR2Q9Y312 384 aaKnown RBP15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 GPSM3Q9Y4H4 160 aa15.81■□□□□ 0.12
CTDSP1-209ENST00000488627 PTPRBP23467 1997 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 NTN3O00634 580 aaPredicted RBP15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 LIASO43766 372 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 ASMTLO95671 621 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 PTMAP06454 111 aaKnown RBP15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 PRPSAP1Q14558 356 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 SIX1Q15475 284 aaPredicted RBP15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 C14orf28Q4W4Y0 310 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 CERCAMQ5T4B2 595 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 ZNF648Q5T619 568 aaPredicted RBP15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 TRIM58Q8NG06 486 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 MDM1Q8TC05 714 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 BLOC1S5Q8TDH9 187 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 GLYATL1Q969I3 302 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 CCDC74AQ96AQ1 378 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 RMI1Q9H9A7 625 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 ARNT2Q9HBZ2 717 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 TRIM39Q9HCM9 518 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 ARFGAP3Q9NP61 516 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 APPL1Q9UKG1 709 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 PRKAB1Q9Y478 270 aa15.8■□□□□ 0.12
CTDSP1-209ENST00000488627 LRP4O75096 1905 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 A0A1W2PQM1 296 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 B4DGG1 531 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 GAPDHSO14556 408 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 BUD23O43709 281 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 NUAK1O60285 661 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 USP12O75317 370 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 SLC25A14O95258 325 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 GLB1P16278 677 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 ZNF8P17098 575 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 CA5AP35218 305 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 TNNT3P45378 269 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 CYP4F3Q08477 520 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 SPARCL1Q14515 664 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 PTPRCAPQ14761 206 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 RTP5Q14D33 572 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 ATP13A5Q4VNC0 1218 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 KHDC1Q4VXA5 237 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 ZNF569Q5MCW4 686 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 SEL1L2Q5TEA6 688 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 SLC30A9Q6PML9 568 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 GLT6D1Q7Z4J2 308 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 ADGRG6Q86SQ4 1221 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 GALNT13Q8IUC8 556 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 NAGSQ8N159 534 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 OR6C4Q8NGE1 309 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 ZDHHC1Q8WTX9 485 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 C1orf54Q8WWF1 131 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 PATE1Q8WXA2 126 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 ZCCHC14Q8WYQ9 949 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 PPP1R2P1Q96PQ5 205 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 ALS2CR12Q96Q35 445 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 FRMD8P1Q9BZ68 369 aaPredicted RBP15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 NRSN2Q9GZP1 204 aa15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 CCDC86Q9H6F5 360 aaKnown RBP15.79■□□□□ 0.12
CTDSP1-209ENST00000488627 ZNHIT2Q9UHR6 403 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms