RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 FKBPLQ9UIM3 349 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 STARD13Q9Y3M8 1113 aa12.67□□□□□ -0.38
NELFE-209ENST00000488426 C1orf232A0A0U1RR37 186 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 TTC34A8MYJ7 566 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.66□□□□□ -0.38
NELFE-209ENST00000488426 EBAG9O00559 213 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 PHGDHO43175 533 aaKnown RBP12.66□□□□□ -0.38
NELFE-209ENST00000488426 IL1BP01584 269 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 SAT1P21673 171 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 GJA4P35212 333 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 EIF2DP41214 584 aaKnown RBP12.66□□□□□ -0.38
NELFE-209ENST00000488426 TTPAP49638 278 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 KPNA2P52292 529 aaKnown RBP12.66□□□□□ -0.38
NELFE-209ENST00000488426 IRF9Q00978 393 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 MESP2Q0VG99 397 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 SEMA3AQ14563 771 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 PTPRRQ15256 657 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 CDKN3Q16667 212 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 TSNAXIP1Q2TAA8 658 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 RBM20Q5T481 1227 aaKnown RBP12.66□□□□□ -0.38
NELFE-209ENST00000488426 HECTD2Q5U5R9 776 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 ATG16L1Q676U5 607 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 C16orf46Q6P387 395 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 MICALCLQ6ZW33 695 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 LDB1Q86U70 411 aaPredicted RBP12.66□□□□□ -0.38
NELFE-209ENST00000488426 NUDCD3Q8IVD9 361 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 CEP97Q8IW35 865 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 PLD6Q8N2A8 252 aaKnown RBP12.66□□□□□ -0.38
NELFE-209ENST00000488426 CCDC63Q8NA47 563 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 CHST14Q8NCH0 376 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 NELL1Q92832 810 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 SEC16BQ96JE7 1060 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 PRMT8Q9NR22 394 aaPredicted RBP12.66□□□□□ -0.38
NELFE-209ENST00000488426 PLA2G4CQ9UP65 541 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 VWA7Q9Y334 891 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 BPTFQ12830 3046 aa12.66□□□□□ -0.38
NELFE-209ENST00000488426 TSPAN11A1L157 253 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 SNX3O60493 162 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 EGFP01133 1207 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 UGT2B4P06133 528 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 NFKBIAP25963 317 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 SLC26A3P40879 764 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 SLC6A11P48066 632 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 HNRNPH2P55795 449 aaKnown RBP12.65□□□□□ -0.38
NELFE-209ENST00000488426 XIAPP98170 497 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 CACNG1Q06432 222 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 PEX6Q13608 980 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 PREPLQ4J6C6 727 aaPredicted RBP12.65□□□□□ -0.38
NELFE-209ENST00000488426 TMEM196Q5HYL7 178 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 FAM47EQ6ZV65 393 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 SFTPA1Q8IWL2 248 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 CBARPQ8N350 705 aaPredicted RBP12.65□□□□□ -0.38
NELFE-209ENST00000488426 PHTF2Q8N3S3 785 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 TERB1Q8NA31 727 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 SUMF1Q8NBK3 374 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 CCDC197Q8NCU1 140 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 RDH11Q8TC12 318 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 HCAR2Q8TDS4 363 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.65□□□□□ -0.38
NELFE-209ENST00000488426 EID2BQ96D98 161 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 NDNQ99608 321 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 ELAC2Q9BQ52 826 aaKnown RBP12.65□□□□□ -0.38
NELFE-209ENST00000488426 NMRAL1Q9HBL8 299 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 POPDC3Q9HBV1 291 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 APPL1Q9UKG1 709 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 FBXO4Q9UKT5 387 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 WASF2Q9Y6W5 498 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 NPIPB15A6NHN6 443 aaPredicted RBP12.65□□□□□ -0.38
NELFE-209ENST00000488426 NDUFS3O75489 264 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 KLHL2O95198 593 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 BGNP21810 368 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 ITIH4Q14624 930 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 PCLAFQ15004 111 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 CERS6Q6ZMG9 384 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 SPATA21Q7Z572 469 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 TBC1D1Q86TI0 1168 aaPredicted RBP12.65□□□□□ -0.38
NELFE-209ENST00000488426 CENPLQ8N0S6 344 aaPredicted RBP12.65□□□□□ -0.38
NELFE-209ENST00000488426 STK40Q8N2I9 435 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 ANKS4BQ8N8V4 417 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 ZBTB44Q8NCP5 570 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 LPGAT1Q92604 370 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 KLHL32Q96NJ5 620 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 OLFM1Q99784 485 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 AARSD1Q9BTE6 412 aaKnown RBP12.65□□□□□ -0.38
NELFE-209ENST00000488426 MECRQ9BV79 373 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 BPIFA1Q9NP55 256 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 SLCO1B3Q9NPD5 702 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 COPG2Q9UBF2 871 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 IL36AQ9UHA7 158 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 CRYL1Q9Y2S2 319 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 SLC30A1Q9Y6M5 507 aa12.65□□□□□ -0.38
NELFE-209ENST00000488426 PRRT4C9JH25 899 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 K7ESF4 209 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 CLDN7O95471 211 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 CPA3P15088 417 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 FDXRP22570 491 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 PPARGP37231 505 aaPredicted RBP12.64□□□□□ -0.39
NELFE-209ENST00000488426 OPRD1P41143 372 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 MAGEA9P43362 315 aa12.64□□□□□ -0.39
NELFE-209ENST00000488426 SUOXP51687 545 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms