RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 SRPK1Q96SB4 655 aaKnown RBP23.54■■□□□ 1.36
RNF38-208ENST00000488058 FSD1LQ9BXM9 530 aa23.54■■□□□ 1.36
RNF38-208ENST00000488058 BPIFA1Q9NP55 256 aa23.54■■□□□ 1.36
RNF38-208ENST00000488058 ARFGAP3Q9NP61 516 aa23.54■■□□□ 1.36
RNF38-208ENST00000488058 RAD18Q9NS91 495 aa23.54■■□□□ 1.36
RNF38-208ENST00000488058 LRIT1Q9P2V4 623 aa23.54■■□□□ 1.36
RNF38-208ENST00000488058 CNOT6Q9ULM6 557 aaKnown RBP23.54■■□□□ 1.36
RNF38-208ENST00000488058 PRKAB1Q9Y478 270 aa23.54■■□□□ 1.36
RNF38-208ENST00000488058 RNF215Q9Y6U7 377 aa23.54■■□□□ 1.36
RNF38-208ENST00000488058 ARHGEF17Q96PE2 2063 aaPredicted RBP23.54■■□□□ 1.36
RNF38-208ENST00000488058 LOC285095A0A1B0GVY8 99 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 STK10O94804 968 aaKnown RBP23.53■■□□□ 1.36
RNF38-208ENST00000488058 FGF1P05230 155 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 GABREP78334 506 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 MPP3Q13368 585 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 HLTFQ14527 1009 aaKnown RBP eCLIP23.53■■□□□ 1.36
RNF38-208ENST00000488058 C3orf38Q5JPI3 329 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 CERCAMQ5T4B2 595 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 CCNJLQ8IV13 435 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 SCARF2Q96GP6 870 aaPredicted RBP23.53■■□□□ 1.36
RNF38-208ENST00000488058 GBA3Q9H227 469 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 VPS18Q9P253 973 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 GUCA1BQ9UMX6 200 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 ENTPD2Q9Y5L3 495 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 ST14Q9Y5Y6 855 aa23.53■■□□□ 1.36
RNF38-208ENST00000488058 SCN8AQ9UQD0 1980 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 GOLGA6L9A6NEM1 432 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 DDX3YO15523 660 aaKnown RBP23.52■■□□□ 1.36
RNF38-208ENST00000488058 GEMP55040 296 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 DCDC1P59894 354 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 PEX6Q13608 980 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 ZNF648Q5T619 568 aaPredicted RBP23.52■■□□□ 1.36
RNF38-208ENST00000488058 C19orf48Q6RUI8 117 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 CHST15Q7LFX5 561 aaPredicted RBP23.52■■□□□ 1.36
RNF38-208ENST00000488058 TRAM1L1Q8N609 369 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 BLOC1S5Q8TDH9 187 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 PATE1Q8WXA2 126 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 ZSCAN5AQ9BUG6 496 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 FICDQ9BVA6 458 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 LRRN3Q9H3W5 708 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 ADGRG1Q9Y653 693 aa23.52■■□□□ 1.36
RNF38-208ENST00000488058 ZFC3H1O60293 1989 aaKnown RBP23.51■■□□□ 1.35
RNF38-208ENST00000488058 NTN3O00634 580 aaPredicted RBP23.51■■□□□ 1.35
RNF38-208ENST00000488058 ANXA9O76027 345 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 SLC25A14O95258 325 aaPredicted RBP23.51■■□□□ 1.35
RNF38-208ENST00000488058 ECEL1O95672 775 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 BPIP17213 487 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 SLC1A5Q15758 541 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 ANKRD20A2Q5SQ80 823 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 ANKRD20A1Q5TYW2 823 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 ANKRD20A3Q5VUR7 823 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 FOXR1Q6PIV2 292 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 TSGA10Q9BZW7 698 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 SATB2Q9UPW6 733 aa23.51■■□□□ 1.35
RNF38-208ENST00000488058 PCYT1BQ9Y5K3 369 aaPredicted RBP23.51■■□□□ 1.35
RNF38-208ENST00000488058 ASPMQ8IZT6 3477 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 A0A1W2PQM1 296 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 RHPN2P1A8MT19 583 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 TLX3O43711 291 aaPredicted RBP23.5■■□□□ 1.35
RNF38-208ENST00000488058 DNAJC6O75061 913 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 EPOP01588 193 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 ACP5P13686 325 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 HLA-DPA1P20036 260 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 PSMB4P28070 264 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 ACTN2P35609 894 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 PRPSAP1Q14558 356 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 GLT6D1Q7Z4J2 308 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 NAGSQ8N159 534 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 ARL14Q8N4G2 192 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 CCDC110Q8TBZ0 833 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 HNRNPLLQ8WVV9 542 aaKnown RBP23.5■■□□□ 1.35
RNF38-208ENST00000488058 OR2AG1Q9H205 316 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 POLR1BQ9H9Y6 1135 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 EPB41L5Q9HCM4 733 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 ATXN10Q9UBB4 475 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 APPL1Q9UKG1 709 aa23.5■■□□□ 1.35
RNF38-208ENST00000488058 ATXN7L1Q9ULK2 861 aaPredicted RBP23.5■■□□□ 1.35
RNF38-208ENST00000488058 TRBV23OR9-2A0A075B6M9 112 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 D6RAR5 112 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 ARHGAP6O43182 974 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 BUD23O43709 281 aaKnown RBP23.49■■□□□ 1.35
RNF38-208ENST00000488058 KRT86O43790 486 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 NUDT21O43809 227 aaKnown RBP23.49■■□□□ 1.35
RNF38-208ENST00000488058 AGTP01019 485 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 LRP8Q14114 963 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 SPRED1Q7Z699 444 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 PHYKPLQ8IUZ5 450 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 RNF10Q8N5U6 811 aaKnown RBP23.49■■□□□ 1.35
RNF38-208ENST00000488058 TTC13Q8NBP0 860 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 GLYATL1Q969I3 302 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 HES6Q96HZ4 224 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 APOL2Q9BQE5 337 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 FOXP3Q9BZS1 431 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 TRABDQ9H4I3 376 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 RMI1Q9H9A7 625 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 HACD3Q9P035 362 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 NFKBIL1Q9UBC1 381 aaPredicted RBP23.49■■□□□ 1.35
RNF38-208ENST00000488058 KCNK6Q9Y257 313 aa23.49■■□□□ 1.35
RNF38-208ENST00000488058 PNLIPP16233 465 aa23.48■■□□□ 1.35
RNF38-208ENST00000488058 ZNF8P17098 575 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms