RNA–Protein interactions for RNA: ENST00000487876.1

RPSA-208, Transcript of ribosomal protein SA, human

TSL 4

Gene RPSA, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPSA-208	ENST00000487876	RAVER1	Q8IY67	606 aa	Known RBP	12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	SYCE1	Q8N0S2	351 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	CACTIN-AS1	Q8N1I8	211 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	TXLNB	Q8N3L3	684 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	UBL4B	Q8N7F7	174 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	PATE1	Q8WXA2	126 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	SCARF2	Q96GP6	870 aa	Predicted RBP	12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	HES6	Q96HZ4	224 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	DEPDC7	Q96QD5	511 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	OR2M4	Q96R27	311 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	GSDMC	Q9BYG8	508 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	GPR63	Q9BZJ6	419 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	BPIFA1	Q9NP55	256 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	TRNAU1AP	Q9NX07	287 aa	Known RBP	12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	TAAR2	Q9P1P5	351 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	TRHDE	Q9UKU6	1024 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	GUCA1B	Q9UMX6	200 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	R3HDM2	Q9Y2K5	976 aa	Known RBP	12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	GPSM3	Q9Y4H4	160 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	RNF215	Q9Y6U7	377 aa		12.81	□□□□□ -0.36
RPSA-208	ENST00000487876	URB1	O60287	2271 aa	Known RBP	12.81	□□□□□ -0.36
RPSA-208	ENST00000487876		A0A1W2PNU3	283 aa	Predicted RBP	12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	PMS2P1	A4D2B8	440 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	RGSL1	A5PLK6	1076 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	TJP3	O95049	919 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	AGT	P01019	485 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	FGF1	P05230	155 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	CCL7	P80098	99 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	KLF1	Q13351	362 aa	Predicted RBP	12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	HLTF	Q14527	1009 aa	Known RBP eCLIP	12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	SLC1A5	Q15758	541 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	ISX	Q2M1V0	245 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	C14orf28	Q4W4Y0	310 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	PYCR3	Q53H96	274 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	ANKRD20A2	Q5SQ80	823 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	ANKRD20A1	Q5TYW2	823 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	ANKRD20A3	Q5VUR7	823 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	TTC30B	Q8N4P2	665 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876		Q8N9G6	341 aa	Predicted RBP	12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	CCDC110	Q8TBZ0	833 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	ZDHHC1	Q8WTX9	485 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	SLC39A7	Q92504	469 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	FICD	Q9BVA6	458 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	SPATA16	Q9BXB7	569 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	CDH19	Q9H159	772 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	DKK4	Q9UBT3	224 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	AK5	Q9Y6K8	562 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876	ADAMTS20	P59510	1910 aa		12.8	□□□□□ -0.36
RPSA-208	ENST00000487876		A0A1W2PQM1	296 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	NTN3	O00634	580 aa	Predicted RBP	12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	ARHGAP6	O43182	974 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	GPR39	O43194	453 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	BUD23	O43709	281 aa	Known RBP	12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	BRINP1	O60477	761 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	DNAJC6	O75061	913 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	USP12	O75317	370 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	ECEL1	O95672	775 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	EML2	O95834	649 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	MPO	P05164	745 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	RPLP0	P05388	317 aa	Known RBP	12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	CETN2	P41208	172 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	ACTR1B	P42025	376 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	DCDC1	P59894	354 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	ACTR1A	P61163	376 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	CCZ1B	P86790	482 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	CCZ1	P86791	482 aa	Predicted RBP	12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	MPP3	Q13368	585 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	RTP5	Q14D33	572 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	ZNF569	Q5MCW4	686 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	CCDC70	Q6NSX1	233 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	RBM44	Q6ZP01	1051 aa	Known RBP	12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	GALNT13	Q8IUC8	556 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	RNF10	Q8N5U6	811 aa	Known RBP	12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	BLOC1S5	Q8TDH9	187 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	ATXN7L3B	Q96GX2	97 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	APOL2	Q9BQE5	337 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	FSD1L	Q9BXM9	530 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	TSGA10	Q9BZW7	698 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	NRSN2	Q9GZP1	204 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	VPS18	Q9P253	973 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	ATXN10	Q9UBB4	475 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	ZNHIT2	Q9UHR6	403 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	METRN	Q9UJH8	293 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	TMPRSS11E	Q9UL52	423 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	ENTPD2	Q9Y5L3	495 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	FAM208B	Q5VWN6	2430 aa		12.79	□□□□□ -0.36
RPSA-208	ENST00000487876	IGSF10	Q6WRI0	2623 aa		12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	TLX3	O43711	291 aa	Predicted RBP	12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	KRT86	O43790	486 aa		12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	MTX2	O75431	263 aa		12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	EPO	P01588	193 aa		12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	PTMA	P06454	111 aa	Known RBP	12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	ZNF8	P17098	575 aa	Predicted RBP	12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	HLA-DPA1	P20036	260 aa		12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	CA5A	P35218	305 aa		12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	ADRA1A	P35348	466 aa		12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	GEM	P55040	296 aa		12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	GDF10	P55107	478 aa		12.78	□□□□□ -0.36
RPSA-208	ENST00000487876	GABRE	P78334	506 aa		12.78	□□□□□ -0.36

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