RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 ACTR1AP61163 376 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 B4GALNT1Q00973 533 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 XRCC4Q13426 336 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 PEX6Q13608 980 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 NOMO1Q15155 1222 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 CCDC181Q5TID7 509 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 IGF2-ASQ6U949 168 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 KDELC1Q6UW63 502 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 B3GNT8Q7Z7M8 397 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 KIAA1328Q86T90 577 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 GALNT13Q8IUC8 556 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 NAGSQ8N159 534 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 ARL14Q8N4G2 192 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 SPC24Q8NBT2 197 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 GPR26Q8NDV2 337 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 WDR36Q8NI36 951 aaKnown RBP11.36□□□□□ -0.59
SPEN-205ENST00000487496 ACTL9Q8TC94 416 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 PATE1Q8WXA2 126 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 ALG3Q92685 438 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 PRR11Q96HE9 360 aaPredicted RBP11.36□□□□□ -0.59
SPEN-205ENST00000487496 OXNAD1Q96HP4 312 aaPredicted RBP11.36□□□□□ -0.59
SPEN-205ENST00000487496 MRGPRX2Q96LB1 330 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 SRPK1Q96SB4 655 aaKnown RBP11.36□□□□□ -0.59
SPEN-205ENST00000487496 OSBPL8Q9BZF1 889 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 C10orf88Q9H8K7 445 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 ASCL3Q9NQ33 180 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 VPS18Q9P253 973 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 ZNHIT2Q9UHR6 403 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 TRHDEQ9UKU6 1024 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 PCDHGA8Q9Y5G5 932 aa11.36□□□□□ -0.59
SPEN-205ENST00000487496 CFAP47Q6ZTR5 3102 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 FAM208BQ5VWN6 2430 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 CCDC187A0A096LP49 1063 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 A0A0U1RQJ8 604 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 MACROD2A1Z1Q3 448 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 PMS2P1A4D2B8 440 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 F5H423 210 aaPredicted RBP11.35□□□□□ -0.59
SPEN-205ENST00000487496 TMX2-CTNND1H3BSU7 103 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 H7C0C1 242 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 AURKAO14965 403 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 RRP8O43159 456 aaKnown RBP11.35□□□□□ -0.59
SPEN-205ENST00000487496 B4GAT1O43505 415 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 SLC4A1P02730 911 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 PYGMP11217 842 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 ITPKBP27987 946 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 RBL1P28749 1068 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 ATP5OP48047 213 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 INHBCP55103 352 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 DCDC1P59894 354 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 ERVPABLB-1P60509 514 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 OTUD4Q01804 1114 aaKnown RBP11.35□□□□□ -0.59
SPEN-205ENST00000487496 KIF5AQ12840 1032 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 LRP8Q14114 963 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 SIRPB2Q5JXA9 342 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 ALS2CLQ60I27 953 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 AADACL2Q6P093 401 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 LRRC69Q6ZNQ3 347 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 ZNF438Q7Z4V0 828 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 SPRED1Q7Z699 444 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 TRAM1L1Q8N609 369 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 LIN37Q96GY3 246 aaPredicted RBP11.35□□□□□ -0.59
SPEN-205ENST00000487496 SLC46A1Q96NT5 459 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 DESI2Q9BSY9 194 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 ZSCAN5AQ9BUG6 496 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 SPATA16Q9BXB7 569 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 FOXP3Q9BZS1 431 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 RMI1Q9H9A7 625 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 RAD18Q9NS91 495 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 NFKBIL1Q9UBC1 381 aaPredicted RBP11.35□□□□□ -0.59
SPEN-205ENST00000487496 TRIM10Q9UDY6 481 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 ATXN7L1Q9ULK2 861 aaPredicted RBP11.35□□□□□ -0.59
SPEN-205ENST00000487496 PRKAB1Q9Y478 270 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 ARHGEF17Q96PE2 2063 aaPredicted RBP11.35□□□□□ -0.59
SPEN-205ENST00000487496 ADAMTS20P59510 1910 aa11.35□□□□□ -0.59
SPEN-205ENST00000487496 ZFYVE26Q68DK2 2539 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 RHPN2P1A8MT19 583 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 PPM1DO15297 605 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 NUAK1O60285 661 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 TJP3O95049 919 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 SLC25A14O95258 325 aaPredicted RBP11.34□□□□□ -0.59
SPEN-205ENST00000487496 RBP3P10745 1247 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 BPIP17213 487 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 RBMS1P29558 406 aaKnown RBP11.34□□□□□ -0.59
SPEN-205ENST00000487496 ALDH4A1P30038 563 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 CCKBRP32239 447 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 CETN2P41208 172 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 CHRNA4P43681 627 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 ABCG1P45844 678 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 PCBP4P57723 403 aaKnown RBP11.34□□□□□ -0.59
SPEN-205ENST00000487496 OR1D5P58170 312 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 EIF3EP60228 445 aaKnown RBP11.34□□□□□ -0.59
SPEN-205ENST00000487496 CCDC173Q0VFZ6 552 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 MPP3Q13368 585 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 BIRC2Q13490 618 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 NR1D2Q14995 579 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 SLC1A5Q15758 541 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 ZNF569Q5MCW4 686 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 ZNF648Q5T619 568 aaPredicted RBP11.34□□□□□ -0.59
SPEN-205ENST00000487496 PDPK2PQ6A1A2 396 aa11.34□□□□□ -0.59
SPEN-205ENST00000487496 FOXR1Q6PIV2 292 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms