RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 VSIG1Q86XK7 387 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 RHOT1Q8IXI2 618 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 ZNF843Q8N446 348 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 PLD5Q8N7P1 536 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 CNTD1Q8N815 330 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 RCBTB1Q8NDN9 531 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 CCDC112Q8NEF3 446 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
SREBF1-215ENST00000487401 CCDC74BQ96LY2 380 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 AGAP3Q96P47 875 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 CEP41Q9BYV8 373 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 STN1Q9H668 368 aaKnown RBP12.35□□□□□ -0.43
SREBF1-215ENST00000487401 RMI1Q9H9A7 625 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 ZFYVE1Q9HBF4 777 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 RAD18Q9NS91 495 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 DDX56Q9NY93 547 aaKnown RBP12.35□□□□□ -0.43
SREBF1-215ENST00000487401 CNOT6Q9ULM6 557 aaKnown RBP12.35□□□□□ -0.43
SREBF1-215ENST00000487401 PRKAB1Q9Y478 270 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 ASXL3Q9C0F0 2248 aa12.35□□□□□ -0.43
SREBF1-215ENST00000487401 IGHV1OR21-1A0A087WYE8 117 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 C3orf70A6NLC5 250 aaPredicted RBP12.34□□□□□ -0.43
SREBF1-215ENST00000487401 AKR1B15C9JRZ8 316 aaPredicted RBP12.34□□□□□ -0.43
SREBF1-215ENST00000487401 SPOPO43791 374 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 SNX2O60749 519 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 DNAJC6O75061 913 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 MFAP3LO75121 409 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 MTA2O94776 668 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 CCL4P13236 92 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 SLC2A4P14672 509 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 MPSTP25325 297 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 CD82P27701 267 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 CSTF2P33240 577 aaKnown RBP eCLIP12.34□□□□□ -0.43
SREBF1-215ENST00000487401 LIMK2P53671 638 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 DYNLT1P63172 113 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 GPLD1P80108 840 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 SQSTM1Q13501 440 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 HENMT1Q5T8I9 393 aaKnown RBP12.34□□□□□ -0.43
SREBF1-215ENST00000487401 NPNTQ6UXI9 565 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 BZW1Q7L1Q6 419 aaKnown RBP12.34□□□□□ -0.43
SREBF1-215ENST00000487401 LYSMD3Q7Z3D4 306 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 CNGA4Q8IV77 575 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 ZSCAN1Q8NBB4 408 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 RNF214Q8ND24 703 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 AGBL5Q8NDL9 886 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 OR4D9Q8NGE8 314 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 OR10G6Q8NH81 332 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 TTC9Q92623 222 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 IMP4Q96G21 291 aaKnown RBP12.34□□□□□ -0.43
SREBF1-215ENST00000487401 TAAR9Q96RI9 348 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 WDR24Q96S15 920 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 SPATA16Q9BXB7 569 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 GPR63Q9BZJ6 419 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 B3GNT4Q9C0J1 378 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 FOXJ2Q9P0K8 574 aa12.34□□□□□ -0.43
SREBF1-215ENST00000487401 OAS3Q9Y6K5 1087 aaKnown RBP12.34□□□□□ -0.43
SREBF1-215ENST00000487401 TP53BP1Q12888 1972 aaPredicted RBP12.34□□□□□ -0.43
SREBF1-215ENST00000487401 FADS2P1A8MWK0 482 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 C9orf172C9J069 976 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 EFSO43281 561 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 GRID2O43424 1007 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 SLC4A1P02730 911 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 ACP5P13686 325 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 COMTP21964 271 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 NOP2P46087 812 aaKnown RBP12.33□□□□□ -0.44
SREBF1-215ENST00000487401 FASLGP48023 281 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 NR2C2P49116 596 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 CDK18Q07002 472 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 NFATC2Q13469 925 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 TFDP2Q14188 446 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 LY6DQ14210 128 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 PCSK7Q16549 785 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 ZNF569Q5MCW4 686 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 ALS2CLQ60I27 953 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 TMEM71Q6P5X7 295 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 MFSD7Q6UXD7 560 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 SLC9B2Q86UD5 537 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 ZNF761Q86XN6 746 aaPredicted RBP12.33□□□□□ -0.44
SREBF1-215ENST00000487401 SFRP1Q8N474 314 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 SLC37A2Q8TED4 501 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 SH3KBP1Q96B97 665 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 SGF29Q96ES7 293 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 SRPK1Q96SB4 655 aaKnown RBP12.33□□□□□ -0.44
SREBF1-215ENST00000487401 HERPUD2Q9BSE4 406 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 OR2AG1Q9H205 316 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 CARD9Q9H257 536 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 GLOD4Q9HC38 313 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 MAGEE1Q9HCI5 957 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 TBC1D29Q9UFV1 150 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 INTUQ9ULD6 942 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 SHOC2Q9UQ13 582 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 KCNK6Q9Y257 313 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 HYOU1Q9Y4L1 999 aa12.33□□□□□ -0.44
SREBF1-215ENST00000487401 BAHCC1Q9P281 2608 aa12.32□□□□□ -0.44
SREBF1-215ENST00000487401 KALRNO60229 2985 aa12.32□□□□□ -0.44
SREBF1-215ENST00000487401 FASNP49327 2511 aaKnown RBP12.32□□□□□ -0.44
SREBF1-215ENST00000487401 OR5K4A6NMS3 321 aa12.32□□□□□ -0.44
SREBF1-215ENST00000487401 STMND1H3BQB6 276 aa12.32□□□□□ -0.44
SREBF1-215ENST00000487401 DUX1O43812 170 aa12.32□□□□□ -0.44
SREBF1-215ENST00000487401 NUAK1O60285 661 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms