RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 TOR1BO14657 336 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 INPP4BO15327 924 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 RFPL3O75679 317 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 RASGRP1O95267 797 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 RBP3P10745 1247 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 MYCLP1P12525 358 aaPredicted RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 ZNF30P17039 623 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 CKMT2P17540 419 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 CA4P22748 312 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 HTR1BP28222 390 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 POLD2P49005 469 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 WNT3AP56704 352 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 RPL26P61254 145 aaKnown RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 CDK3Q00526 305 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 CDK18Q07002 472 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 KLF1Q13351 362 aaPredicted RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 XRCC4Q13426 336 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 ALS2CLQ60I27 953 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 DOK6Q6PKX4 331 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 BZW1Q7L1Q6 419 aaKnown RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 PID1Q7Z2X4 250 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 SLC35F3Q8IY50 421 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 SYCE1Q8N0S2 351 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 UBL4BQ8N7F7 174 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 KYQ8NBH2 561 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 CCDC112Q8NEF3 446 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 OR56A4Q8NGH8 313 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 CCL4L1Q8NHW4 92 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 ATG4AQ8WYN0 398 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 GATA6Q92908 595 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 GTPBP3Q969Y2 492 aaKnown RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 AP2M1Q96CW1 435 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 LYSMD1Q96S90 227 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 MLPHQ9BV36 600 aaPredicted RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 RIOK2Q9BVS4 552 aaKnown RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 TEX101Q9BY14 249 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 ADGRE3Q9BY15 652 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 FRMD8Q9BZ67 464 aaPredicted RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 SLC13A1Q9BZW2 595 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 TMEM168Q9H0V1 697 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 GBA3Q9H227 469 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 CYP4F12Q9HCS2 524 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 ZNF358Q9NW07 568 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 SIRPGQ9P1W8 387 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 SPASTQ9UBP0 616 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 RSPH14Q9UHP6 348 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 RPL26L1Q9UNX3 145 aaKnown RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 SHOC2Q9UQ13 582 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 EFR3BQ9Y2G0 817 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 TMEM98Q9Y2Y6 226 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 ZNF711Q9Y462 761 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 NEUROG3Q9Y4Z2 214 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 PCYT1BQ9Y5K3 369 aaPredicted RBP7.13□□□□□ -1.27
UBE4B-209ENST00000487244 ST14Q9Y5Y6 855 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 CSNK1G3Q9Y6M4 447 aa7.13□□□□□ -1.27
UBE4B-209ENST00000487244 CELSR3Q9NYQ7 3312 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 LOC285095A0A1B0GVY8 99 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 NEMP2A6NFY4 417 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 LMO7DNF2Z398 122 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 YY2O15391 372 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 KCNN4O15554 427 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 GPR39O43194 453 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 MTSS1O43312 755 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 KRT86O43790 486 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 TJP3O95049 919 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 TRIM16O95361 564 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 NDST3O95803 873 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 ATP1A1P05023 1023 aaKnown RBP7.12□□□□□ -1.27
UBE4B-209ENST00000487244 CEACAM5P06731 702 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 ANXA6P08133 673 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 CCDC175P0C221 793 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 CKMT1AP12532 417 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 ACP1P24666 158 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 NFKBIAP25963 317 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 PSMB4P28070 264 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 MSX1P28360 303 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 GPR1P46091 355 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 SPINT3P49223 89 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 DAB2P98082 770 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 DPTQ07507 201 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 SMAD1Q15797 465 aaKnown RBP7.12□□□□□ -1.27
UBE4B-209ENST00000487244 SLC14A2Q15849 920 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 KCTD19Q17RG1 926 aaPredicted RBP7.12□□□□□ -1.27
UBE4B-209ENST00000487244 SIRPB2Q5JXA9 342 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 RNFT1Q5M7Z0 435 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 PERM1Q5SV97 790 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 HENMT1Q5T8I9 393 aaKnown RBP7.12□□□□□ -1.27
UBE4B-209ENST00000487244 HES3Q5TGS1 186 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 MEI1Q5TIA1 1274 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 ZCCHC8Q6NZY4 707 aaKnown RBP7.12□□□□□ -1.27
UBE4B-209ENST00000487244 GUSBP11Q6P575 273 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 DARS2Q6PI48 645 aaKnown RBP7.12□□□□□ -1.27
UBE4B-209ENST00000487244 UNQ6494/PRO21346Q6UXR6 183 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 ADAMTSL4Q6UY14 1074 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 MICALCLQ6ZW33 695 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 ZNF765Q7L2R6 523 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 CDKL3Q8IVW4 592 aaPredicted RBP7.12□□□□□ -1.27
UBE4B-209ENST00000487244 TXLNBQ8N3L3 684 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 SLC25A41Q8N5S1 370 aa7.12□□□□□ -1.27
UBE4B-209ENST00000487244 RNF10Q8N5U6 811 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms