RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 DPEP3Q9H4B8 488 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 C10orf88Q9H8K7 445 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 KCNK13Q9HB14 408 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 TM9SF3Q9HD45 589 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 PALMDQ9NP74 551 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 ARHGEF3Q9NR81 526 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 MCM9Q9NXL9 1143 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 DLL3Q9NYJ7 618 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 DNMT3BQ9UBC3 853 aaKnown RBP5.49□□□□□ -1.53
COPS3-209ENST00000486810 VPS51Q9UID3 782 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 GMEB2Q9UKD1 530 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 ERGIC3Q9Y282 383 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 DERAQ9Y315 318 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 KLF2Q9Y5W3 355 aaPredicted RBP5.49□□□□□ -1.53
COPS3-209ENST00000486810 SNX14Q9Y5W7 946 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 SESN1Q9Y6P5 492 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 POLR3AO14802 1390 aaPredicted RBP5.49□□□□□ -1.53
COPS3-209ENST00000486810 REREQ9P2R6 1566 aa5.49□□□□□ -1.53
COPS3-209ENST00000486810 MROH7Q68CQ1 1323 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 YTHDC2Q9H6S0 1430 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 TONSLQ96HA7 1378 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 A1L4Q6 167 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 EFCAB10A6NFE3 127 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 LRRIQ4A6NIV6 560 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ARGFXA6NJG6 315 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 CCT8L1PA6NM43 557 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 H0YIZ8 118 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 AGPSO00116 658 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 AP3D1O14617 1153 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ZNF213O14771 459 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 CAPN9O14815 690 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 PER2O15055 1255 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 KCNN4O15554 427 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 SMAD6O43541 496 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 SSX5O60225 188 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 TLR5O60602 858 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 PSIP1O75475 530 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 PIGNO95427 931 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 LARGE1O95461 756 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 VNN1O95497 513 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 IL6P05231 212 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 MYL4P12829 197 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ANXA8P13928 327 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 NQO1P15559 274 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 ITGB6P18564 788 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 DRD4P21917 467 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 CCNE1P24864 410 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 KLRC1P26715 233 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 CIITAP33076 1130 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ME1P48163 572 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 PIP4K2AP48426 406 aaPredicted RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 PCP4P48539 62 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 TKTL1P51854 596 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 AP2S1P53680 142 aaPredicted RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 PEX3P56589 373 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 STX17P56962 302 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 PROK1P58294 105 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 HTRA4P83105 476 aaPredicted RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 FOXO1Q12778 655 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 IFIT5Q13325 482 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 HNRNPDQ14103 355 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 SCARB2Q14108 478 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 KRT32Q14532 448 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 NPY5RQ15761 445 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 KCNJ8Q15842 424 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 AANATQ16613 207 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ME3Q16798 604 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 UGP2Q16851 508 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 TBRG1Q3YBR2 411 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 GLE1Q53GS7 698 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 FAM209BQ5JX69 171 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ANXA8L1Q5VT79 327 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 DUPD1Q68J44 220 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 RBM43Q6ZSC3 357 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 GRASPQ7Z6J2 395 aaPredicted RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 TBC1D1Q86TI0 1168 aaPredicted RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 TMTC1Q8IUR5 882 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 CACNA2D3Q8IZS8 1091 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ABRAQ8N0Z2 381 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 KRT78Q8N1N4 520 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ARHGAP24Q8N264 748 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ARL14Q8N4G2 192 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ALLCQ8N6M5 410 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ENDOVQ8N8Q3 282 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 SPATA5Q8NB90 893 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 NAXEQ8NCW5 288 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 ZNF461Q8TAF7 563 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 AGR3Q8TD06 166 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 TMEM171Q8WVE6 324 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 DNAJC9Q8WXX5 260 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 SPSB4Q96A44 273 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 VPS39Q96JC1 886 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 CRAMP1Q96RY5 1269 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 OLFM1Q99784 485 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 SLC29A1Q99808 456 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 NUDT16L1Q9BRJ7 211 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 BRIP1Q9BX63 1249 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 CLPBQ9H078 707 aa5.48□□□□□ -1.53
COPS3-209ENST00000486810 LSG1Q9H089 658 aaKnown RBP5.48□□□□□ -1.53
COPS3-209ENST00000486810 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms