RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 DNAJC1Q96KC8 554 aaKnown RBP11.76□□□□□ -0.53
HPS4-214ENST00000485842 CARS2Q9HA77 564 aaKnown RBP11.76□□□□□ -0.53
HPS4-214ENST00000485842 IL26Q9NPH9 171 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 CASS4Q9NQ75 786 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 SPASTQ9UBP0 616 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 PCYOX1Q9UHG3 505 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 NEU2Q9Y3R4 380 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 OAS3Q9Y6K5 1087 aaKnown RBP11.76□□□□□ -0.53
HPS4-214ENST00000485842 DMXL1Q9Y485 3027 aa11.76□□□□□ -0.53
HPS4-214ENST00000485842 TCRBV7S3A2A0A539 114 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 GOLGA8MH3BSY2 632 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 TNFRSF10CO14798 259 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 TM4SF5O14894 197 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 LDB2O43679 373 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 UGT1A9O60656 530 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 MTX2O75431 263 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 URI1O94763 535 aaPredicted RBP11.75□□□□□ -0.53
HPS4-214ENST00000485842 TMEM63AO94886 807 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 SLC25A14O95258 325 aaPredicted RBP11.75□□□□□ -0.53
HPS4-214ENST00000485842 PRAMEF1O95521 474 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 CEACAM5P06731 702 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 CELA2BP08218 269 aaPredicted RBP11.75□□□□□ -0.53
HPS4-214ENST00000485842 UGT1A6P19224 532 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 CSRP1P21291 193 aaKnown RBP11.75□□□□□ -0.53
HPS4-214ENST00000485842 UGT1A1P22309 533 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 UGT1A4P22310 534 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 UGT1A3P35503 534 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 UGT1A5P35504 534 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 PTGIRP43119 386 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 PTK6Q13882 451 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 DEFB133Q30KQ1 61 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 ATP13A5Q4VNC0 1218 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 ZNF648Q5T619 568 aaPredicted RBP11.75□□□□□ -0.53
HPS4-214ENST00000485842 ZDHHC20Q5W0Z9 365 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 PDPK2PQ6A1A2 396 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 PSAPL1Q6NUJ1 521 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 MICALCLQ6ZW33 695 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 KANSL1Q7Z3B3 1105 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 JAMLQ86YT9 394 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 SLC25A45Q8N413 288 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 CPT1BQ92523 772 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 SLCO2A1Q92959 643 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 GLYATL1Q969I3 302 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 COX14Q96I36 57 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 RUNDC3BQ96NL0 473 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 KRT12Q99456 494 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 TRIM51Q9BSJ1 452 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 UGT1A7Q9HAW7 530 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 UGT1A10Q9HAW8 530 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 UGT1A8Q9HAW9 530 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 PCOLCE2Q9UKZ9 415 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 CNOT6Q9ULM6 557 aaKnown RBP11.75□□□□□ -0.53
HPS4-214ENST00000485842 SUFUQ9UMX1 484 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 DOLKQ9UPQ8 538 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 SLC17A4Q9Y2C5 497 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 CFAP54Q96N23 3096 aa11.75□□□□□ -0.53
HPS4-214ENST00000485842 PLXNB3Q9ULL4 1909 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 HEATR9A2RTY3 570 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 NEMP2A6NFY4 417 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 KIF2AO00139 706 aaPredicted RBP11.74□□□□□ -0.53
HPS4-214ENST00000485842 GAPDHSO14556 408 aaPredicted RBP11.74□□□□□ -0.53
HPS4-214ENST00000485842 GIPC1O14908 333 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 TTI1O43156 1089 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 KCNK5O95279 499 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 IVLP07476 585 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 ANXA6P08133 673 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 ALPPL2P10696 532 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 ADCY8P40145 1251 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 HADHAP40939 763 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 CRADDP78560 199 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 SARNPP82979 210 aaKnown RBP11.74□□□□□ -0.53
HPS4-214ENST00000485842 CDK16Q00536 496 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 ITGA9Q13797 1035 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 ZRANB3Q5FWF4 1079 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 DBX2Q6ZNG2 339 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 ZNF534Q76KX8 674 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 FSTL5Q8N475 847 aaPredicted RBP11.74□□□□□ -0.53
HPS4-214ENST00000485842 SPATA4Q8NEY3 305 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 PPHLN1Q8NEY8 458 aaKnown RBP11.74□□□□□ -0.53
HPS4-214ENST00000485842 CNDP2Q96KP4 475 aaKnown RBP11.74□□□□□ -0.53
HPS4-214ENST00000485842 OR2M4Q96R27 311 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 CLPBQ9H078 707 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 TMEM168Q9H0V1 697 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 OR2AG1Q9H205 316 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 ASB8Q9H765 288 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 NLE1Q9NVX2 485 aaPredicted RBP11.74□□□□□ -0.53
HPS4-214ENST00000485842 BFARQ9NZS9 450 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 VPS18Q9P253 973 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 FTSJ1Q9UET6 329 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 APPL1Q9UKG1 709 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 TMPRSS11EQ9UL52 423 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 PRKAB1Q9Y478 270 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 GPSM3Q9Y4H4 160 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 DGKBQ9Y6T7 804 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 SPTBN4Q9H254 2564 aa11.74□□□□□ -0.53
HPS4-214ENST00000485842 SPAARA0A1B0GVQ0 90 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 AP3B1O00203 1094 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 TRIM38O00635 465 aa11.73□□□□□ -0.53
HPS4-214ENST00000485842 DNALI1O14645 258 aaPredicted RBP11.73□□□□□ -0.53
HPS4-214ENST00000485842 SIGLEC6O43699 453 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms