RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 SUDS3Q9H7L9 328 aaPredicted RBP7.77□□□□□ -1.17
MACF1-220ENST00000485063 RMI1Q9H9A7 625 aa7.77□□□□□ -1.17
MACF1-220ENST00000485063 BPIFA1Q9NP55 256 aa7.77□□□□□ -1.17
MACF1-220ENST00000485063 MRPL40Q9NQ50 206 aaKnown RBP7.77□□□□□ -1.17
MACF1-220ENST00000485063 NFKBIL1Q9UBC1 381 aaPredicted RBP7.77□□□□□ -1.17
MACF1-220ENST00000485063 KLF15Q9UIH9 416 aa7.77□□□□□ -1.17
MACF1-220ENST00000485063 ANGPTL2Q9UKU9 493 aa7.77□□□□□ -1.17
MACF1-220ENST00000485063 GPSM3Q9Y4H4 160 aa7.77□□□□□ -1.17
MACF1-220ENST00000485063 PCDHGA1Q9Y5H4 931 aa7.77□□□□□ -1.17
MACF1-220ENST00000485063 SPO11Q9Y5K1 396 aa7.77□□□□□ -1.17
MACF1-220ENST00000485063 FRYLO94915 3013 aa7.77□□□□□ -1.17
MACF1-220ENST00000485063 PCNX2A6NKB5 2137 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 GLYATL1P3A0A0U1RQE8 302 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 GPR89AB7ZAQ6 455 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 AP3B1O00203 1094 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 PGRMC1O00264 195 aaKnown RBP7.76□□□□□ -1.17
MACF1-220ENST00000485063 TRIM38O00635 465 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 CES2O00748 559 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 YY2O15391 372 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 USP12O75317 370 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 METTL18O95568 372 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 AP2A1O95782 977 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 ATP1A1P05023 1023 aaKnown RBP7.76□□□□□ -1.17
MACF1-220ENST00000485063 IVLP07476 585 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 GPR89BP0CG08 455 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 CKMT1AP12532 417 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 BPIP17213 487 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 ACP1P24666 158 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 PMLP29590 882 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 ADRA1AP35348 466 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 HADHAP40939 763 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 GNG11P61952 73 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 E2F1Q01094 437 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 DNAJC3Q13217 504 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 BIRC2Q13490 618 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 LAMB3Q13751 1172 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 GTF2H3Q13889 308 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 NR0B2Q15466 257 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 MARK2Q7KZI7 788 aaKnown RBP7.76□□□□□ -1.17
MACF1-220ENST00000485063 GALNT13Q8IUC8 556 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 RASGEF1CQ8N431 466 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 TAB3Q8N5C8 712 aaPredicted RBP7.76□□□□□ -1.17
MACF1-220ENST00000485063 PNPLA1Q8N8W4 532 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 GPR26Q8NDV2 337 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 FAM46DQ8NEK8 389 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 OR6C4Q8NGE1 309 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 ADAMTS14Q8WXS8 1223 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 OR1E3Q8WZA6 343 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 GLYATL1Q969I3 302 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 COX14Q96I36 57 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 OR2M4Q96R27 311 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 OSBPL9Q96SU4 736 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 AGAP2Q99490 1192 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 ZCCHC2Q9C0B9 1178 aaKnown RBP7.76□□□□□ -1.17
MACF1-220ENST00000485063 CLPBQ9H078 707 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 TMEM168Q9H0V1 697 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 ABCG4Q9H172 646 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 TCEAL2Q9H3H9 227 aaPredicted RBP7.76□□□□□ -1.17
MACF1-220ENST00000485063 DPEP2Q9H4A9 486 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 ARNT2Q9HBZ2 717 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 TRIM39Q9HCM9 518 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 FGF22Q9HCT0 170 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 RAB6BQ9NRW1 208 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 TRNAU1APQ9NX07 287 aaKnown RBP7.76□□□□□ -1.17
MACF1-220ENST00000485063 IL17CQ9P0M4 197 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 VPS18Q9P253 973 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 GULP1Q9UBP9 304 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 ZNHIT2Q9UHR6 403 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 APPL1Q9UKG1 709 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 SUFUQ9UMX1 484 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 SNX12Q9UMY4 172 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 GPR34Q9UPC5 381 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 SLC17A4Q9Y2C5 497 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 TMEM98Q9Y2Y6 226 aa7.76□□□□□ -1.17
MACF1-220ENST00000485063 ZNF106Q9H2Y7 1883 aaKnown RBP7.75□□□□□ -1.17
MACF1-220ENST00000485063 CPED1A4D0V7 1026 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 CTAGE9A4FU28 777 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 FADS2P1A8MWK0 482 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 AURKAO14965 403 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 ZW10O43264 779 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 BUD23O43709 281 aaKnown RBP7.75□□□□□ -1.17
MACF1-220ENST00000485063 VEGFDO43915 354 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 SOD1P00441 154 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 CEACAM5P06731 702 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 GP1BAP07359 652 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 GIMD1P0DJR0 217 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 PAFAH1B1P43034 410 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 POLD2P49005 469 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 ACADVLP49748 655 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 BASP1P80723 227 aaKnown RBP7.75□□□□□ -1.17
MACF1-220ENST00000485063 SARNPP82979 210 aaKnown RBP7.75□□□□□ -1.17
MACF1-220ENST00000485063 CDH17Q12864 832 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 LRP8Q14114 963 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 SEPT6Q14141 434 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 SPARCL1Q14515 664 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 SIX1Q15475 284 aaPredicted RBP7.75□□□□□ -1.17
MACF1-220ENST00000485063 TCEA2Q15560 299 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 LDLRAP1Q5SW96 308 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 KCTD11Q693B1 232 aa7.75□□□□□ -1.17
MACF1-220ENST00000485063 CHST15Q7LFX5 561 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms