RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 ATP6V1E2Q96A05 226 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 VMP1Q96GC9 406 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 CDHR1Q96JP9 859 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 C7orf26Q96N11 449 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 BBS4Q96RK4 519 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 PCYT2Q99447 389 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 CMKLR1Q99788 373 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 PHF7Q9BWX1 381 aaPredicted RBP2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 BARHL1Q9BZE3 327 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 MAGEE1Q9HCI5 957 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 ANKEF1Q9NU02 776 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 KIAA1456Q9P272 454 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 CFDP1Q9UEE9 299 aaPredicted RBP2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 AMDHD2Q9Y303 409 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 OR2W1Q9Y3N9 320 aa2.99□□□□□ -1.93
LAPTM4A-202ENST00000483117 TP53BP1Q12888 1972 aaPredicted RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 CORO1AP31146 461 aaKnown RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 TUBP50607 506 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 EFNA5P52803 228 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 HNRNPH2P55795 449 aaKnown RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 KRTAP10-3P60369 221 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 DCAF7P61962 342 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 TDGQ13569 410 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 C2orf68Q2NKX9 166 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 CCDC30Q5VVM6 783 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 HIST2H2BDQ6DRA6 164 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 DHX40Q8IX18 779 aaKnown RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 RNF113BQ8IZP6 322 aaKnown RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 NDUFAF2Q8N183 169 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 ZCCHC9Q8N567 271 aaKnown RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 ZBTB2Q8N680 514 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 PLD5Q8N7P1 536 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 BEST2Q8NFU1 509 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 MAGEC3Q8TD91 643 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 ZNF524Q96C55 264 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 HVCN1Q96D96 273 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 BAG1Q99933 345 aaPredicted RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 CHCHD6Q9BRQ6 235 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 HEMGNQ9BXL5 484 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 MRPL9Q9BYD2 267 aaKnown RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 TTYH1Q9H313 450 aaPredicted RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 PREBQ9HCU5 417 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 GPR34Q9UPC5 381 aa2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 LSM4Q9Y4Z0 139 aaKnown RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 TDRD9Q8NDG6 1382 aaKnown RBP2.98□□□□□ -1.93
LAPTM4A-202ENST00000483117 IGKV3D-20A0A0C4DH25 116 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 SYNDIG1LA6NDD5 238 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 TMEM202A6NGA9 273 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 IFNL4K9M1U5 179 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 HEXAP06865 529 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 NR1D1P20393 614 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 CHMP24386 653 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 PSMA3P25788 255 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 POU1F1P28069 291 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 OAS2P29728 719 aaKnown RBP2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 SHMT1P34896 483 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 UBA7P41226 1012 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 CLK1P49759 484 aaKnown RBP2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 CCR5P51681 352 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 DRG2P55039 364 aaKnown RBP2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 ZBED6P86452 979 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 EFNB1P98172 346 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 PDE1BQ01064 536 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 PMP22Q01453 160 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 MEA1Q16626 185 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 SLC45A4Q5BKX6 768 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 PDSS1Q5T2R2 415 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 HECTD3Q5T447 861 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 MAP3K21Q5TCX8 1036 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 NAA35Q5VZE5 725 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 TRNP1Q6NT89 227 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 LCTLQ6UWM7 567 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 HEATR4Q86WZ0 1026 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 TDRPQ86YL5 185 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 SPEM1Q8N4L4 309 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 CNBD1Q8NA66 436 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 USP38Q8NB14 1042 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 KLHDC9Q8NEP7 349 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 OR10V1Q8NGI7 309 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 UCMAQ8WVF2 138 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 HTRA1Q92743 480 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 ELP4Q96EB1 424 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 ZMAT2Q96NC0 199 aaKnown RBP2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 MPHOSPH8Q99549 860 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 MTERF1Q99551 399 aaKnown RBP2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 BARD1Q99728 777 aaKnown RBP2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 REEP2Q9BRK0 252 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 SDF4Q9BRK5 362 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 LRRC1Q9BTT6 524 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 POLR3CQ9BUI4 534 aaPredicted RBP2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 MOV10L1Q9BXT6 1211 aaKnown RBP2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 ZWILCHQ9H900 591 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 GPR108Q9NPR9 543 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 HCFC1R1Q9NWW0 138 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 TMEM160Q9NX00 188 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 AASSQ9UDR5 926 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 FAM96BQ9Y3D0 163 aa2.97□□□□□ -1.93
LAPTM4A-202ENST00000483117 PGPEP1LA6NFU8 196 aa2.96□□□□□ -1.94
LAPTM4A-202ENST00000483117 EXTL3O43909 919 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms