RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SLC1A5Q15758 541 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 PDPK2PQ6A1A2 396 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 AADACL2Q6P093 401 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 DARS2Q6PI48 645 aaKnown RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 CCNJLQ8IV13 435 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 SFTPA2Q8IWL1 248 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 LSMEM2Q8N112 164 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 TRAM1L1Q8N609 369 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 GPR26Q8NDV2 337 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 CCDC112Q8NEF3 446 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 ZDHHC1Q8WTX9 485 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 PPP1R2P1Q96PQ5 205 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 PLEKHG4BQ96PX9 1271 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 GFM1Q96RP9 751 aaKnown RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 SPATA16Q9BXB7 569 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 C10orf88Q9H8K7 445 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 HACD3Q9P035 362 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 LRIT1Q9P2V4 623 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 RABGEF1Q9UJ41 708 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 PACSIN2Q9UNF0 486 aaPredicted RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 AAR2Q9Y312 384 aaKnown RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 ST14Q9Y5Y6 855 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 OAS3Q9Y6K5 1087 aaKnown RBP11.79□□□□□ -0.52
HMGN1-213ENST00000482192 RNF215Q9Y6U7 377 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 AKAP13Q12802 2813 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 USP24Q9UPU5 2620 aa11.79□□□□□ -0.52
HMGN1-213ENST00000482192 SPEGQ15772 3267 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 GPR89AB7ZAQ6 455 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 D6RAR5 112 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 AURKAO14965 403 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 DDX3YO15523 660 aaKnown RBP11.78□□□□□ -0.52
HMGN1-213ENST00000482192 KRT86O43790 486 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 DNAJC6O75061 913 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 SLC25A14O95258 325 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-213ENST00000482192 ECEL1O95672 775 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 MPOP05164 745 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 GPR89BP0CG08 455 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 BPIP17213 487 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 ACTN2P35609 894 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 LSSP48449 732 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 PDX1P52945 283 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 GEMP55040 296 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 GABREP78334 506 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 CCL7P80098 99 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 BIRC2Q13490 618 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 PRPSAP1Q14558 356 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 ANKRD20A2Q5SQ80 823 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 ANKRD20A1Q5TYW2 823 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 ANKRD20A3Q5VUR7 823 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 ZDHHC20Q5W0Z9 365 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 SPRED1Q7Z699 444 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 C17orf82Q86X59 251 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-213ENST00000482192 PHYKPLQ8IUZ5 450 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 SLC25A41Q8N5S1 370 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 Q8N9G6 341 aaPredicted RBP11.78□□□□□ -0.52
HMGN1-213ENST00000482192 UBE2Q2Q8WVN8 375 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 GLYATL1Q969I3 302 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 ATXN7L3BQ96GX2 97 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 HES6Q96HZ4 224 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 FAM118BQ9BPY3 351 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 CARD9Q9H257 536 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 LRRN3Q9H3W5 708 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 POLR1BQ9H9Y6 1135 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 ZNHIT2Q9UHR6 403 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 ENTPD2Q9Y5L3 495 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 IGF2RP11717 2491 aa11.78□□□□□ -0.52
HMGN1-213ENST00000482192 A0A087WV48 116 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 A0A1W2PQM1 296 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 RHPN2P1A8MT19 583 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 TMX2-CTNND1H3BSU7 103 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 CASC3O15234 703 aaKnown RBP11.77□□□□□ -0.53
HMGN1-213ENST00000482192 ZW10O43264 779 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 NUAK1O60285 661 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 DXOO77932 396 aaKnown RBP11.77□□□□□ -0.53
HMGN1-213ENST00000482192 MAZP56270 477 aaKnown RBP11.77□□□□□ -0.53
HMGN1-213ENST00000482192 KLF1Q13351 362 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-213ENST00000482192 TBC1D25Q3MII6 688 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 CHST15Q7LFX5 561 aaPredicted RBP11.77□□□□□ -0.53
HMGN1-213ENST00000482192 GLT6D1Q7Z4J2 308 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 ZNF438Q7Z4V0 828 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 NAGSQ8N159 534 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 ARL14Q8N4G2 192 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 SNIP1Q8TAD8 396 aaKnown RBP11.77□□□□□ -0.53
HMGN1-213ENST00000482192 DTX3LQ8TDB6 740 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 BLOC1S5Q8TDH9 187 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 LRRC45Q96CN5 670 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 SPATA13Q96N96 652 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 VPS35Q96QK1 796 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 GORASP1Q9BQQ3 440 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 TRIM39Q9HCM9 518 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 ATXN10Q9UBB4 475 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 GUCA1BQ9UMX6 200 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 SATB2Q9UPW6 733 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 PKP3Q9Y446 797 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 PRKAB1Q9Y478 270 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 PLEKHM1Q9Y4G2 1056 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 FRYQ5TBA9 3013 aa11.77□□□□□ -0.53
HMGN1-213ENST00000482192 CCDC187A0A096LP49 1063 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms