RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 MLPHQ9BV36 600 aaPredicted RBP15.13■□□□□ 0.01
LIMS3-203ENST00000480744 CEP41Q9BYV8 373 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 FAM83DQ9H4H8 585 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 ZNHIT6Q9NWK9 470 aaKnown RBP15.13■□□□□ 0.01
LIMS3-203ENST00000480744 PKD2L2Q9NZM6 624 aa15.13■□□□□ 0.01
LIMS3-203ENST00000480744 OAS3Q9Y6K5 1087 aaKnown RBP15.13■□□□□ 0.01
LIMS3-203ENST00000480744 EML2O95834 649 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 SLC4A1P02730 911 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 MMP2P08253 660 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 TMEM253P0C7T8 217 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 ACP5P13686 325 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 CD82P27701 267 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 CSTF2P33240 577 aaKnown RBP eCLIP15.12■□□□□ 0.01
LIMS3-203ENST00000480744 SPINT3P49223 89 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 PPIDQ08752 370 aaKnown RBP15.12■□□□□ 0.01
LIMS3-203ENST00000480744 AP1B1Q10567 949 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 ZBTB17Q13105 803 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 TRA2AQ13595 282 aaKnown RBP eCLIP15.12■□□□□ 0.01
LIMS3-203ENST00000480744 ALS2CLQ60I27 953 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 KDELC2Q7Z4H8 507 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 ZSCAN1Q8NBB4 408 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 CCDC112Q8NEF3 446 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 OR4D9Q8NGE8 314 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 OR8K1Q8NGG5 319 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 PMEPA1Q969W9 287 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 TAAR9Q96RI9 348 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 WDR24Q96S15 920 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 LYSMD1Q96S90 227 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 ARHGAP9Q9BRR9 750 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 MAK16Q9BXY0 300 aaKnown RBP15.12■□□□□ 0.01
LIMS3-203ENST00000480744 ADGRE3Q9BY15 652 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 TSPY26PQ9H489 355 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 TMEM9Q9P0T7 183 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 VPS18Q9P253 973 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 KCNK6Q9Y257 313 aa15.12■□□□□ 0.01
LIMS3-203ENST00000480744 PCYT1BQ9Y5K3 369 aaPredicted RBP15.12■□□□□ 0.01
LIMS3-203ENST00000480744 FADS2P1A8MWK0 482 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 ANKRD66B4E2M5 251 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 STMND1H3BQB6 276 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 J3QKU1 62 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 APOL1O14791 398 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 CBFA2T2O43439 604 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 SNX2O60749 519 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 DNAJC6O75061 913 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 KRT1P04264 644 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 FGF3P11487 239 aaPredicted RBP15.11■□□□□ 0.01
LIMS3-203ENST00000480744 TNNT1P13805 278 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 MAPK9P45984 424 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 IFI35P80217 286 aaPredicted RBP15.11■□□□□ 0.01
LIMS3-203ENST00000480744 NFATC2Q13469 925 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 TRIM14Q14142 442 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 ODF2Q5BJF6 829 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 SNAP47Q5SQN1 464 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 HENMT1Q5T8I9 393 aaKnown RBP15.11■□□□□ 0.01
LIMS3-203ENST00000480744 LYSMD3Q7Z3D4 306 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 FAM129CQ86XR2 697 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 SFRP1Q8N474 314 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 PLD5Q8N7P1 536 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 CNTD1Q8N815 330 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 AGBL5Q8NDL9 886 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 OR10G6Q8NH81 332 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 SLC35G2Q8TBE7 412 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 EXTL1Q92935 676 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 ART4Q93070 314 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 DNAJC7Q99615 494 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 DPYSL5Q9BPU6 564 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 STN1Q9H668 368 aaKnown RBP15.11■□□□□ 0.01
LIMS3-203ENST00000480744 ARFGAP3Q9NP61 516 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 SPTLC3Q9NUV7 552 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 CNOT6Q9ULM6 557 aaKnown RBP15.11■□□□□ 0.01
LIMS3-203ENST00000480744 PCDHGA4Q9Y5G9 962 aa15.11■□□□□ 0.01
LIMS3-203ENST00000480744 SSU72P8A0A1W2PR75 194 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 A8MU76 341 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 B8ZZF3 427 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 DUX1O43812 170 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 TPM1P09493 284 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 PIRTP0C851 137 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 THRAP10827 490 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 FASLGP48023 281 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 ATP1A2P50993 1020 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 DYNLT1P63172 113 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 GPLD1P80108 840 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 HHEXQ03014 270 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 PCSK7Q16549 785 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 ASTE1Q2TB18 679 aaPredicted RBP15.1■□□□□ 0.01
LIMS3-203ENST00000480744 NPNTQ6UXI9 565 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 B4GALNT4Q76KP1 1039 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 DTX1Q86Y01 620 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 RFX6Q8HWS3 928 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 RAVER1Q8IY67 606 aaKnown RBP15.1■□□□□ 0.01
LIMS3-203ENST00000480744 AGAP3Q96P47 875 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 SPATA16Q9BXB7 569 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 BRD8Q9H0E9 1235 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 SLC39A1Q9NY26 324 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 TBC1D29Q9UFV1 150 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 SHOC2Q9UQ13 582 aa15.1■□□□□ 0.01
LIMS3-203ENST00000480744 RGSL1A5PLK6 1076 aa15.09■□□□□ 0.01
LIMS3-203ENST00000480744 EFCAB7A8K855 629 aa15.09■□□□□ 0.01
LIMS3-203ENST00000480744 PPP1R12AO14974 1030 aaPredicted RBP15.09■□□□□ 0.01
LIMS3-203ENST00000480744 GRID2O43424 1007 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms