RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 OR4K2Q8NGD2 314 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 GLYATL1Q969I3 302 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 C19orf43Q9BQ61 176 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 GSDMCQ9BYG8 508 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 SUDS3Q9H7L9 328 aaPredicted RBP20.33■□□□□ 0.85
VARS-224ENST00000479051 RMI1Q9H9A7 625 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 EIF2B3Q9NR50 452 aaKnown RBP20.33■□□□□ 0.85
VARS-224ENST00000479051 SMARCAL1Q9NZC9 954 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 APPL1Q9UKG1 709 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 SUFUQ9UMX1 484 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 TMEM98Q9Y2Y6 226 aa20.33■□□□□ 0.85
VARS-224ENST00000479051 AP3B1O00203 1094 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 BUD23O43709 281 aaKnown RBP20.32■□□□□ 0.84
VARS-224ENST00000479051 TRIM16O95361 564 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 FTH1P19P0C7X4 201 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 CKMT2P17540 419 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 HADHAP40939 763 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 PAFAH1B1P43034 410 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 POLD2P49005 469 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 RPIAP49247 311 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 FOXK2Q01167 660 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 ILF3Q12906 894 aaKnown RBP eCLIP20.32■□□□□ 0.84
VARS-224ENST00000479051 SEPT6Q14141 434 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 PROX2Q3B8N5 592 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 TAF8Q7Z7C8 310 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 GALNT13Q8IUC8 556 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 FAM181AQ8N9Y4 354 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 VPS35Q96QK1 796 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 CLPBQ9H078 707 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 CAAP1Q9H8G2 361 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 IL26Q9NPH9 171 aa20.32■□□□□ 0.84
VARS-224ENST00000479051 TRNAU1APQ9NX07 287 aaKnown RBP20.32■□□□□ 0.84
VARS-224ENST00000479051 CNOT6Q9ULM6 557 aaKnown RBP20.32■□□□□ 0.84
VARS-224ENST00000479051 LRP4O75096 1905 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 GPR89AB7ZAQ6 455 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 YY2O15391 372 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 KRT14P02533 472 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 GPR89BP0CG08 455 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 GIMD1P0DJR0 217 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 CDK4P11802 303 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 TPH1P17752 444 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 POU6F1Q14863 301 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 TCEA2Q15560 299 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 C6orf132Q5T0Z8 1188 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 TTC27Q6P3X3 843 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 FAM151BQ6UXP7 276 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 MARK2Q7KZI7 788 aaKnown RBP20.31■□□□□ 0.84
VARS-224ENST00000479051 OR52K1Q8NGK4 314 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 GDAP1Q8TB36 358 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 SCARF2Q96GP6 870 aaPredicted RBP20.31■□□□□ 0.84
VARS-224ENST00000479051 CAPZA3Q96KX2 299 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 OR2M4Q96R27 311 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 TMEM168Q9H0V1 697 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 TRIM39Q9HCM9 518 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 RNF14Q9UBS8 474 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 GPSM3Q9Y4H4 160 aa20.31■□□□□ 0.84
VARS-224ENST00000479051 SCN8AQ9UQD0 1980 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.3■□□□□ 0.84
VARS-224ENST00000479051 ADRB1P08588 477 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 CASQ1P31415 396 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 ETF1P62495 437 aaKnown RBP20.3■□□□□ 0.84
VARS-224ENST00000479051 ILKQ13418 452 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 MSLNQ13421 630 aaPredicted RBP20.3■□□□□ 0.84
VARS-224ENST00000479051 GTF2H3Q13889 308 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 TRIP13Q15645 432 aaPredicted RBP20.3■□□□□ 0.84
VARS-224ENST00000479051 CHRNA6Q15825 494 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 ATP13A5Q4VNC0 1218 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 KCTD16Q68DU8 428 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 NYAP1Q6ZVC0 841 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 C17orf53Q8N3J3 647 aaPredicted RBP20.3■□□□□ 0.84
VARS-224ENST00000479051 APOLD1Q96LR9 279 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 ZCCHC2Q9C0B9 1178 aaKnown RBP20.3■□□□□ 0.84
VARS-224ENST00000479051 PCDHGA1Q9Y5H4 931 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 DCHS1Q96JQ0 3298 aa20.3■□□□□ 0.84
VARS-224ENST00000479051 RFPL3O75679 317 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 PRAMEF1O95521 474 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 ECEL1O95672 775 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 CELA2BP08218 269 aaPredicted RBP20.29■□□□□ 0.84
VARS-224ENST00000479051 CKMT1AP12532 417 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 VPS41P49754 854 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 ZNF140P52738 457 aaPredicted RBP20.29■□□□□ 0.84
VARS-224ENST00000479051 SARNPP82979 210 aaKnown RBP20.29■□□□□ 0.84
VARS-224ENST00000479051 CDK16Q00536 496 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 GPS1Q13098 491 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 DNAJC3Q13217 504 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 LRP8Q14114 963 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 NR0B2Q15466 257 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 CCDC157Q569K6 752 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 LDLRAP1Q5SW96 308 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 FAM46DQ8NEK8 389 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 OR13C4Q8NGS5 318 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 ZNF398Q8TD17 642 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 GPBAR1Q8TDU6 330 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 STYXQ8WUJ0 223 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 TRIM44Q96DX7 344 aaPredicted RBP20.29■□□□□ 0.84
VARS-224ENST00000479051 TTC25Q96NG3 672 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 RUNDC3BQ96NL0 473 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 BOCQ9BWV1 1114 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 CASS4Q9NQ75 786 aa20.29■□□□□ 0.84
VARS-224ENST00000479051 PIH1D1Q9NWS0 290 aaKnown RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms