RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 DTLQ9NZJ0 730 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 ZNHIT2Q9UHR6 403 aa14.34□□□□□ -0.11
SMARCE1-209ENST00000478349 KALRNO60229 2985 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 KIR2DS5A0A0G2JLQ3 304 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 A0A0G2JNG1 304 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 ANKRD66B4E2M5 251 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 B8ZZF3 427 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 KIR2DS3K7RE56 304 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 MAP3K6O95382 1288 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 CLDN7O95471 211 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 JCHAINP01591 159 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 FUCA1P04066 466 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 THRAP10827 490 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 KDELR1P24390 212 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 CD86P42081 329 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 SPINT3P49223 89 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 EPHA4P54764 986 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 HHEXQ03014 270 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 LY6DQ14210 128 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 KIR2DS5Q14953 304 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC14A2Q15849 920 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 HENMT1Q5T8I9 393 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 LRRC38Q5VT99 294 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 PDPK2PQ6A1A2 396 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 TMEM71Q6P5X7 295 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 CHST15Q7LFX5 561 aaPredicted RBP14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 TRIM74Q86UV6 250 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 SFTPA2Q8IWL1 248 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC37A2Q8TED4 501 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 CCDC42Q96M95 316 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 RNF157Q96PX1 679 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 DNAJC7Q99615 494 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 ZSCAN5AQ9BUG6 496 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 XPO4Q9C0E2 1151 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 CARD9Q9H257 536 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 SARS2Q9NP81 518 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 FOXJ2Q9P0K8 574 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 NENFQ9UMX5 172 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 HEY1Q9Y5J3 304 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 SMG1Q96Q15 3661 aaKnown RBP14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 RP1P56715 2156 aa14.33□□□□□ -0.12
SMARCE1-209ENST00000478349 B4E171 279 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 C9orf172C9J069 976 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 KCNK1O00180 336 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 CAPN5O15484 640 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 ETV5P41161 510 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 TSPAN7P41732 249 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC1A1P43005 524 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 TAS2R40P59535 323 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 DCDC1P59894 354 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 AP1B1Q10567 949 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 MESDQ14696 234 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 TGIF1Q15583 401 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 QPCTQ16769 361 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 SKOR2Q2VWA4 1001 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 ATP13A4Q4VNC1 1196 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 DCAF12Q5T6F0 453 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 WDR74Q6RFH5 385 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 LYSMD3Q7Z3D4 306 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 TMPRSS9Q7Z410 1059 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 ZFAND4Q86XD8 727 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 FAM129CQ86XR2 697 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 DTX1Q86Y01 620 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 IL22RA1Q8N6P7 574 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 PQLC3Q8N755 202 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 RCBTB1Q8NDN9 531 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 PATE1Q8WXA2 126 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 KIAA1143Q96AT1 154 aaPredicted RBP14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 ZPBPQ9BS86 351 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 FAM117AQ9C073 453 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 ZFYVE1Q9HBF4 777 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 DDX56Q9NY93 547 aaKnown RBP14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 PCDHGA4Q9Y5G9 962 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 ZNF462Q96JM2 2506 aa14.32□□□□□ -0.12
SMARCE1-209ENST00000478349 ANKRD36A6QL64 1941 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 AGRPO00253 132 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 PPM1DO15297 605 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 MTSS1O43312 755 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 PRLP01236 227 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 KRT1P04264 644 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 ACP5P13686 325 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 F3P13726 295 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 NIPAL4Q0D2K0 466 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 PTPRRQ15256 657 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 NT5DC3Q86UY8 548 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 PTCD2Q8WV60 388 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 ART4Q93070 314 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 EFHD1Q9BUP0 239 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 SPATA16Q9BXB7 569 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC39A1Q9NY26 324 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 NFKBIL1Q9UBC1 381 aaPredicted RBP14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 HELZ2Q9BYK8 2649 aaKnown RBP14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 LRRK1Q38SD2 2015 aa14.31□□□□□ -0.12
SMARCE1-209ENST00000478349 GRID2O43424 1007 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 DNAJC6O75061 913 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 SLC25A14O95258 325 aaPredicted RBP14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 ATP1A1P05023 1023 aaKnown RBP14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 CCL4P13236 92 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 VCLP18206 1134 aa14.3□□□□□ -0.12
SMARCE1-209ENST00000478349 CSF2RBP32927 897 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms