RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PCDHGC3Q9UN70 934 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 PCYT1BQ9Y5K3 369 aaPredicted RBP7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 SLC30A1Q9Y6M5 507 aa7.24□□□□□ -1.25
SPTLC1-205ENST00000477888 ZNF469Q96JG9 3925 aaPredicted RBP7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 KIR2DS5A0A0G2JLQ3 304 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 A0A0G2JNG1 304 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 RCCD1A6NED2 376 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 LILRA5A6NI73 299 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 BECN2A8MW95 431 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 KIR2DS3K7RE56 304 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 P4HA2O15460 535 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 KCNN4O15554 427 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 RAB40ALP0C0E4 278 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 F3P13726 295 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 DRD2P14416 443 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 FOLR1P15328 257 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 TYRP1P17643 537 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 ADRA1BP35368 520 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 FLT3P36888 993 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 ETV3P41162 512 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 RGRP47804 291 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 ME1P48163 572 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 CSNK1DP48730 415 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 PMS1P54277 932 aaKnown RBP7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 RRADP55042 308 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 SNX16P57768 344 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 POLR2LP62875 67 aaKnown RBP7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 UBE2IP63279 158 aaKnown RBP7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 DPTQ07507 201 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 GPS2Q13227 327 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 KIR2DS5Q14953 304 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 CNGA3Q16281 694 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 RAB6CQ53S08 254 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 HGSNATQ68CP4 663 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 LCN10Q6JVE6 187 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 DUS1LQ6P1R4 473 aaKnown RBP7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 HSD11B1LQ7Z5J1 315 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 MRGPRGQ86SM5 289 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 PHLDB2Q86SQ0 1253 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 PASD1Q8IV76 773 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 SMYD4Q8IYR2 804 aaPredicted RBP7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 ZNF808Q8N4W9 903 aaPredicted RBP7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 SLC38A9Q8NBW4 561 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 FNIP1Q8TF40 1166 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 CCDC47Q96A33 483 aaKnown RBP7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 NSMCE3Q96MG7 304 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 MDFIQ99750 246 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 SLX1AQ9BQ83 275 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 HERPUD2Q9BSE4 406 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 NLNQ9BYT8 704 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 RAB6CQ9H0N0 254 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 CHST8Q9H2A9 424 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 ATP13A3Q9H7F0 1226 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 UCK1Q9HA47 277 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 ZBTB20Q9HC78 741 aaPredicted RBP7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 PDE7BQ9NP56 450 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 SEMA5BQ9P283 1151 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 B4GALT6Q9UBX8 382 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 ZNHIT2Q9UHR6 403 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 RARRES3Q9UL19 164 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 TCFL5Q9UL49 500 aa7.23□□□□□ -1.25
SPTLC1-205ENST00000477888 CHD5Q8TDI0 1954 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 A0A1W2PQJ5 194 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 OR5K4A6NMS3 321 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 BHMG1C9JSJ3 638 aaPredicted RBP7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 C19orf84I3L1E1 186 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 DNAJC6O75061 913 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 RASSF9O75901 435 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 UBXN7O94888 489 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 HEXIM1O94992 359 aaKnown RBP7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 ALPPP05187 535 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 CAPN1P07384 714 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 XRCC1P18887 633 aaPredicted RBP7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 SERPINA4P29622 427 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 SCNN1AP37088 669 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 ART1P52961 327 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 YBEYP58557 167 aaPredicted RBP7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 PDE1BQ01064 536 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 CETN1Q12798 172 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 TUBB3Q13509 450 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 ATP1A4Q13733 1029 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 MYBPC3Q14896 1274 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 CACHD1Q5VU97 1274 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 RAET1GQ6H3X3 334 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 CYB5D1Q6P9G0 228 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 TMEM26Q6ZUK4 368 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 Q6ZVL8 140 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 MARK2Q7KZI7 788 aaKnown RBP7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 TECPR1Q7Z6L1 1165 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 SRLQ86TD4 932 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 ZNF354CQ86Y25 554 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 GALNT13Q8IUC8 556 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 ZADH2Q8N4Q0 377 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 LZTR1Q8N653 840 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 ENDOVQ8N8Q3 282 aaKnown RBP7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 MR1Q95460 341 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 ZDHHC16Q969W1 377 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 CCDC120Q96HB5 630 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 SGSM3Q96HU1 749 aa7.22□□□□□ -1.25
SPTLC1-205ENST00000477888 SLC41A2Q96JW4 573 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms