RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 LVRNQ6Q4G3 990 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 ADAMTSL4Q6UY14 1074 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 PROSER1Q86XN7 944 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 NRROSQ86YC3 692 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 NRSN1Q8IZ57 195 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 ARL10Q8N8L6 244 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 DCBLD1Q8N8Z6 715 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 Q8N9G6 341 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-221ENST00000477561 ACTL9Q8TC94 416 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 CCHCR1Q8TD31 782 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 MAIP1Q8WWC4 291 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 TADA1Q96BN2 335 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 EID2BQ96D98 161 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 OXNAD1Q96HP4 312 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-221ENST00000477561 HIC2Q96JB3 615 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 QKIQ96PU8 341 aaKnown RBP eCLIP8.23□□□□□ -1.09
HDAC6-221ENST00000477561 LYSMD1Q96S90 227 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 CCDC3Q9BQI4 270 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 GPR63Q9BZJ6 419 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 DPEP2Q9H4A9 486 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 FAM83DQ9H4H8 585 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 ZFYVE1Q9HBF4 777 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 ARFGAP3Q9NP61 516 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 SPATS2LQ9NUQ6 558 aaKnown RBP8.23□□□□□ -1.09
HDAC6-221ENST00000477561 PKD2L2Q9NZM6 624 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 NCKIPSDQ9NZQ3 722 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 FAM153AQ9UHL3 310 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 RABGEF1Q9UJ41 708 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 DNPEPQ9ULA0 475 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 RAXQ9Y2V3 346 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 PRKAB1Q9Y478 270 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 SPO11Q9Y5K1 396 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 ST14Q9Y5Y6 855 aa8.23□□□□□ -1.09
HDAC6-221ENST00000477561 OAS3Q9Y6K5 1087 aaKnown RBP8.23□□□□□ -1.09
HDAC6-221ENST00000477561 KMT2BQ9UMN6 2715 aaPredicted RBP8.23□□□□□ -1.09
HDAC6-221ENST00000477561 ZFHX4Q86UP3 3567 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 FADS2P1A8MWK0 482 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 HACD1B0YJ81 288 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 KCNN4O15554 427 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 NOBOXO60393 691 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 USP12O75317 370 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 CSO75390 466 aaKnown RBP8.22□□□□□ -1.09
HDAC6-221ENST00000477561 NDST3O95803 873 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 TEAD1P28347 426 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 ADCY8P40145 1251 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 CHRNA4P43681 627 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 WNT3AP56704 352 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 EIF3EP60228 445 aaKnown RBP8.22□□□□□ -1.09
HDAC6-221ENST00000477561 CCL7P80098 99 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 CTBSQ01459 385 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 XRCC4Q13426 336 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 SIRPB2Q5JXA9 342 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 TEX35Q5T0J7 233 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 ZNF648Q5T619 568 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-221ENST00000477561 DARS2Q6PI48 645 aaKnown RBP8.22□□□□□ -1.09
HDAC6-221ENST00000477561 KDELC1Q6UW63 502 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 ZNF765Q7L2R6 523 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 NLRP8Q86W28 1048 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 SDR16C5Q8N3Y7 309 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 GPR26Q8NDV2 337 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 SPATA4Q8NEY3 305 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 IPMKQ8NFU5 416 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 GPBAR1Q8TDU6 330 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 PATE1Q8WXA2 126 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 NAT6Q93015 286 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 CCDC74AQ96AQ1 378 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 COX14Q96I36 57 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 MS4A14Q96JA4 679 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 MRGPRX2Q96LB1 330 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 RUNDC3BQ96NL0 473 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 DEPDC7Q96QD5 511 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 SPATA16Q9BXB7 569 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 MAGEE1Q9HCI5 957 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 BPIFA1Q9NP55 256 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 RSPH14Q9UHP6 348 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 ZNHIT2Q9UHR6 403 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 CNOT6Q9ULM6 557 aaKnown RBP8.22□□□□□ -1.09
HDAC6-221ENST00000477561 SLC17A4Q9Y2C5 497 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 ZNF711Q9Y462 761 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 PCYT1BQ9Y5K3 369 aaPredicted RBP8.22□□□□□ -1.09
HDAC6-221ENST00000477561 LRP4O75096 1905 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 ZZEF1O43149 2961 aa8.22□□□□□ -1.09
HDAC6-221ENST00000477561 DMXL2Q8TDJ6 3036 aa8.21□□□□□ -1.09
HDAC6-221ENST00000477561 GOLGA4Q13439 2230 aaKnown RBP8.21□□□□□ -1.09
HDAC6-221ENST00000477561 TRBV23OR9-2A0A075B6M9 112 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 LOC285095A0A1B0GVY8 99 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 TCRBV7S2A1N4TA0A589 114 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 AGRPO00253 132 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 DYNC1I1O14576 645 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 MTSS1O43312 755 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 BUD23O43709 281 aaKnown RBP8.21□□□□□ -1.1
HDAC6-221ENST00000477561 TJP3O95049 919 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 AGTP01019 485 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 FGGP02679 453 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 MPOP05164 745 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 FGF1P05230 155 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 PYGLP06737 847 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 TUBBP07437 444 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 IVLP07476 585 aa8.21□□□□□ -1.1
HDAC6-221ENST00000477561 RBP3P10745 1247 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms