RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZNF529Q6P280 563 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 KLC3Q6P597 504 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM88Q6PEY1 159 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ARSKQ6UWY0 536 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 CLEC9AQ6UXN8 241 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 B3GNT6Q6ZMB0 384 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TRIM67Q6ZTA4 783 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TAOK1Q7L7X3 1001 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 OTOP2Q7RTS6 562 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 LRRC70Q7Z2Q7 622 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ATG9AQ7Z3C6 839 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 NANOGNBQ7Z5D8 188 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ABI3BPQ7Z7G0 1075 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 AMIGO3Q86WK7 504 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF280BQ86YH2 543 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 SIAH3Q8IW03 269 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 CDAN1Q8IWY9 1227 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 FAM126BQ8IXS8 530 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF679Q8IYX0 411 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 MYOCDQ8IZQ8 938 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 SYNE4Q8N205 404 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 CPXM2Q8N436 756 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 PDCL2Q8N4E4 241 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 LILRA3Q8N6C8 439 aaPredicted RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 FITM2Q8N6M3 262 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 AMER2Q8N7J2 671 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 PLA2G15Q8NCC3 412 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 CCNYQ8ND76 341 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 NUP43Q8NFH3 380 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 OR8K5Q8NH50 307 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 DNAJB14Q8TBM8 379 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TBC1D15Q8TC07 691 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 UBLCP1Q8WVY7 318 aaPredicted RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 C17orf50Q8WW18 174 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 GLMPQ8WWB7 406 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 EDARADDQ8WWZ3 215 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 LINC01599Q8WXQ3 324 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 SLC9A6Q92581 669 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 LPGAT1Q92604 370 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 LPPQ93052 612 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 EXT2Q93063 718 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ARHGEF26Q96DR7 871 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 C19orf60Q96EN9 201 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 MCRS1Q96EZ8 462 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 EDC3Q96F86 508 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TSPAN17Q96FV3 270 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 BORCS6Q96GS4 357 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 FAM46AQ96IP4 442 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 PIWIL1Q96J94 861 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 BTBD6Q96KE9 485 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 RPL10LQ96L21 214 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TMEM68Q96MH6 324 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 HS6ST2Q96MM7 605 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF560Q96MR9 790 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 PWWP2AQ96N64 755 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF830Q96NB3 372 aaPredicted RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ZNF558Q96NG5 402 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 SLC46A1Q96NT5 459 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TUBA1CQ9BQE3 449 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 CLSTN3Q9BQT9 956 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 KRTAP3-3Q9BYR6 98 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 KRTAP3-2Q9BYR7 98 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 PKIBQ9C010 78 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TRIM2Q9C040 744 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TTYH3Q9C0H2 523 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 LSG1Q9H089 658 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ATG10Q9H0Y0 220 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 PLK3Q9H4B4 646 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 PDZD7Q9H5P4 517 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 RMND5AQ9H871 391 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 NOL11Q9H8H0 719 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 AKTIPQ9H8T0 292 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 ECT2Q9H8V3 914 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 GPN1Q9HCN4 374 aaPredicted RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 PALMDQ9NP74 551 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TLR8Q9NR97 1041 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 HOMER3Q9NSC5 361 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 QPCTLQ9NXS2 382 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 NKX1-2Q9UD57 310 aaPredicted RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 STEAP1Q9UHE8 339 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 SLC23A1Q9UHI7 598 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 MAGEL2Q9UJ55 1249 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TRMT6Q9UJA5 497 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 DBR1Q9UK59 544 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 RAB21Q9UL25 225 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 CNOT6Q9ULM6 557 aaKnown RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 PLAGL1Q9UM63 463 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 CLEC4AQ9UMR7 237 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 SIT1Q9Y3P8 196 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 NAALAD2Q9Y3Q0 740 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 SNX11Q9Y5W9 270 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 SPACA6W5XKT8 324 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 NOS1P29475 1434 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 TROQ12816 1431 aaPredicted RBP2.9□□□□□ -1.95
HMGN4-202ENST00000477243 HIVEP2P31629 2446 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 UTYO14607 1347 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 IL16Q14005 1332 aa2.9□□□□□ -1.95
HMGN4-202ENST00000477243 FRYQ5TBA9 3013 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms