RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 SIRPGQ9P1W8 387 aa12.35□□□□□ -0.43
APTX-220ENST00000476858 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
APTX-220ENST00000476858 SNX12Q9UMY4 172 aa12.35□□□□□ -0.43
APTX-220ENST00000476858 SLC17A4Q9Y2C5 497 aa12.35□□□□□ -0.43
APTX-220ENST00000476858 DGKBQ9Y6T7 804 aa12.35□□□□□ -0.43
APTX-220ENST00000476858 COL27A1Q8IZC6 1860 aaPredicted RBP12.34□□□□□ -0.43
APTX-220ENST00000476858 LMO7DNF2Z398 122 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 PDE2AO00408 941 aaPredicted RBP12.34□□□□□ -0.43
APTX-220ENST00000476858 TOR1BO14657 336 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 TNFSF14O43557 240 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 LDB2O43679 373 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 DNAJC6O75061 913 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 TNFP01375 233 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 HTR1BP28222 390 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 TEAD1P28347 426 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 HMGCLP35914 325 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 CDKN1CP49918 316 aaPredicted RBP12.34□□□□□ -0.43
APTX-220ENST00000476858 GNG11P61952 73 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 CCDC173Q0VFZ6 552 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 P3H1Q32P28 736 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 CCDC38Q502W7 563 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 CERCAMQ5T4B2 595 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 RAB44Q7Z6P3 723 aaPredicted RBP12.34□□□□□ -0.43
APTX-220ENST00000476858 OR4K2Q8NGD2 314 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 CCHCR1Q8TD31 782 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 SCARF2Q96GP6 870 aaPredicted RBP12.34□□□□□ -0.43
APTX-220ENST00000476858 CDC6Q99741 560 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 RAB6BQ9NRW1 208 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 NLGN3Q9NZ94 848 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 ATXN10Q9UBB4 475 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 SPASTQ9UBP0 616 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 FKBPLQ9UIM3 349 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 PLXNB3Q9ULL4 1909 aa12.34□□□□□ -0.43
APTX-220ENST00000476858 H3BM21 787 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 TNFRSF10CO14798 259 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 KIF5CO60282 957 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 AP2A1O95782 977 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 CTSEP14091 401 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 ZNF8P17098 575 aaPredicted RBP12.33□□□□□ -0.44
APTX-220ENST00000476858 NFKBIAP25963 317 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 ADCY8P40145 1251 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 VPS41P49754 854 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 ARSDP51689 593 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 ZNF140P52738 457 aaPredicted RBP12.33□□□□□ -0.44
APTX-220ENST00000476858 DCDC1P59894 354 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 XIAPP98170 497 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 CTBSQ01459 385 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 PRPSAP1Q14558 356 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 PYCR3Q53H96 274 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 CCDC70Q6NSX1 233 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 DRICH1Q6PGQ1 229 aaPredicted RBP12.33□□□□□ -0.44
APTX-220ENST00000476858 ADGRG6Q86SQ4 1221 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 NLRP8Q86W28 1048 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 DNAJC1Q96KC8 554 aaKnown RBP12.33□□□□□ -0.44
APTX-220ENST00000476858 ZNF778Q96MU6 729 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 SCNM1Q9BWG6 230 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 BOCQ9BWV1 1114 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 OR2AG1Q9H205 316 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 FAM96AQ9H5X1 160 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 ARNT2Q9HBZ2 717 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 NFKBIL1Q9UBC1 381 aaPredicted RBP12.33□□□□□ -0.44
APTX-220ENST00000476858 SLC23A2Q9UGH3 650 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 TTC7AQ9ULT0 858 aaPredicted RBP12.33□□□□□ -0.44
APTX-220ENST00000476858 DRG1Q9Y295 367 aaKnown RBP12.33□□□□□ -0.44
APTX-220ENST00000476858 AAR2Q9Y312 384 aaKnown RBP12.33□□□□□ -0.44
APTX-220ENST00000476858 NEU2Q9Y3R4 380 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 CSNK1G3Q9Y6M4 447 aa12.33□□□□□ -0.44
APTX-220ENST00000476858 PTPRBP23467 1997 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 ZNF106Q9H2Y7 1883 aaKnown RBP12.32□□□□□ -0.44
APTX-220ENST00000476858 OR51F1A6NGY5 319 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 NOBOXO60393 691 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 ASMTLO95671 621 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 IVLP07476 585 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 ANXA6P08133 673 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 CKMT2P17540 419 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 STIP1P31948 543 aaKnown RBP12.32□□□□□ -0.44
APTX-220ENST00000476858 MAZP56270 477 aaKnown RBP12.32□□□□□ -0.44
APTX-220ENST00000476858 CRADDP78560 199 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 SEMA5AQ13591 1074 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 PEX6Q13608 980 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 POU6F1Q14863 301 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 PLA2G4EQ3MJ16 856 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 C6orf132Q5T0Z8 1188 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 ANKRD22Q5VYY1 191 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 SLC30A9Q6PML9 568 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 ZNF534Q76KX8 674 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 TAF8Q7Z7C8 310 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 ZNF547Q8IVP9 402 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 TRAM1L1Q8N609 369 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 GPBAR1Q8TDU6 330 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 BTN2A2Q8WVV5 523 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 ADAMTS14Q8WXS8 1223 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 GLYATL1Q969I3 302 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 PBKQ96KB5 322 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 CAPZA3Q96KX2 299 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 FRMD8P1Q9BZ68 369 aaPredicted RBP12.32□□□□□ -0.44
APTX-220ENST00000476858 LRRC40Q9H9A6 602 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.32□□□□□ -0.44
APTX-220ENST00000476858 GULP1Q9UBP9 304 aa12.32□□□□□ -0.44
APTX-220ENST00000476858 SLC2A6Q9UGQ3 507 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms