RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 RFLNAQ6ZTI6 216 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 NYAP1Q6ZVC0 841 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 B4GALNT4Q76KP1 1039 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 TRIM74Q86UV6 250 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 PHYKPLQ8IUZ5 450 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 TRAM1L1Q8N609 369 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 AVL9Q8NBF6 648 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 SPC24Q8NBT2 197 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 ACRBPQ8NEB7 543 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 SPATA22Q8NHS9 363 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 KRT35Q92764 455 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 TMEM159Q96B96 161 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 SCARF2Q96GP6 870 aaPredicted RBP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 LIN37Q96GY3 246 aaPredicted RBP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 COX14Q96I36 57 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 FCRL5Q96RD9 977 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 TRIB3Q96RU7 358 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 OSBPL8Q9BZF1 889 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.69□□□□□ -0.22
TMCO1-205ENST00000476143 FRYQ5TBA9 3013 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 APC2O95996 2303 aa13.69□□□□□ -0.22
TMCO1-205ENST00000476143 MIF4GDA9UHW6 222 aaKnown RBP13.68□□□□□ -0.22
TMCO1-205ENST00000476143 PJA2O43164 708 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 SLC25A14O95258 325 aaPredicted RBP13.68□□□□□ -0.22
TMCO1-205ENST00000476143 ECEL1O95672 775 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 SOD1P00441 154 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 EPOP01588 193 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 PIRTP0C851 137 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 JMJD7P0C870 316 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 HLA-DPA1P20036 260 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 ALDH4A1P30038 563 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 MARCKSL1P49006 195 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 GEMP55040 296 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 CCL7P80098 99 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 GTF2H3Q13889 308 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 IHHQ14623 411 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 PYCR3Q53H96 274 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 IGF2-ASQ6U949 168 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 RAD9BQ6WBX8 426 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 CHST15Q7LFX5 561 aaPredicted RBP13.68□□□□□ -0.22
TMCO1-205ENST00000476143 SPRED1Q7Z699 444 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 PIM3Q86V86 326 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 FBXO39Q8N4B4 442 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 TTC13Q8NBP0 860 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 IPMKQ8NFU5 416 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 GDAP1Q8TB36 358 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 KCNE4Q8WWG9 221 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 AHCYL2Q96HN2 611 aaKnown RBP13.68□□□□□ -0.22
TMCO1-205ENST00000476143 TTC25Q96NG3 672 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 AGAP2Q99490 1192 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 DPYSL5Q9BPU6 564 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 TSGA10Q9BZW7 698 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 CARD9Q9H257 536 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 SPATS2LQ9NUQ6 558 aaKnown RBP13.68□□□□□ -0.22
TMCO1-205ENST00000476143 UBP1Q9NZI7 540 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 NFKBIL1Q9UBC1 381 aaPredicted RBP13.68□□□□□ -0.22
TMCO1-205ENST00000476143 PKP3Q9Y446 797 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 RNF215Q9Y6U7 377 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 ARHGEF17Q96PE2 2063 aaPredicted RBP13.68□□□□□ -0.22
TMCO1-205ENST00000476143 SPEGQ15772 3267 aa13.68□□□□□ -0.22
TMCO1-205ENST00000476143 PLD2O14939 933 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 TLX3O43711 291 aaPredicted RBP13.67□□□□□ -0.22
TMCO1-205ENST00000476143 NRDCO43847 1150 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 CPNE6O95741 557 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 ATP1A1P05023 1023 aaKnown RBP13.67□□□□□ -0.22
TMCO1-205ENST00000476143 FGF1P05230 155 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 VCLP18206 1134 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 CCKBRP32239 447 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 PTPN7P35236 360 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 GPR3P46089 330 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 UCNP55089 124 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 MAZP56270 477 aaKnown RBP13.67□□□□□ -0.22
TMCO1-205ENST00000476143 WNT3AP56704 352 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 GSDMDP57764 484 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 EIF3EP60228 445 aaKnown RBP13.67□□□□□ -0.22
TMCO1-205ENST00000476143 CCDC173Q0VFZ6 552 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 WASHC5Q12768 1159 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 NOMO1Q15155 1222 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 AMZ1Q400G9 498 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 PHF19Q5T6S3 580 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 DARS2Q6PI48 645 aaKnown RBP13.67□□□□□ -0.22
TMCO1-205ENST00000476143 RAB11FIP2Q7L804 512 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 GLT6D1Q7Z4J2 308 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 TMC3Q7Z5M5 1100 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 NRROSQ86YC3 692 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 ZNF567Q8N184 647 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 SLC25A41Q8N5S1 370 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 SH3KBP1Q96B97 665 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 TADA1Q96BN2 335 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 PLEKHG4BQ96PX9 1271 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 SLC38A3Q99624 504 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 CMKLR1Q99788 373 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 HERPUD2Q9BSE4 406 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 ZCCHC2Q9C0B9 1178 aaKnown RBP13.67□□□□□ -0.22
TMCO1-205ENST00000476143 TRIM39Q9HCM9 518 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 RABGEF1Q9UJ41 708 aa13.67□□□□□ -0.22
TMCO1-205ENST00000476143 AAR2Q9Y312 384 aaKnown RBP13.67□□□□□ -0.22
TMCO1-205ENST00000476143 ZFC3H1O60293 1989 aaKnown RBP13.67□□□□□ -0.22
TMCO1-205ENST00000476143 OR5K4A6NMS3 321 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms