RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 SAGE2PA6NJ88 616 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 EVPLLA8MZ36 301 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 PLA2G6O60733 806 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 THRBP10828 461 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 MTHFD1P11586 935 aaKnown RBP10.52□□□□□ -0.72
ABCF1-205ENST00000475993 NUDT1P36639 197 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 HCAR3P49019 387 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 DUSP7Q16829 419 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 IMPG1Q17R60 797 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 OTUD3Q5T2D3 398 aaPredicted RBP10.52□□□□□ -0.72
ABCF1-205ENST00000475993 OR6B2Q6IFH4 312 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 KCNMB4Q86W47 210 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 ZC3HC1Q86WB0 502 aaKnown RBP10.52□□□□□ -0.72
ABCF1-205ENST00000475993 PTRH1Q86Y79 214 aaKnown RBP10.52□□□□□ -0.72
ABCF1-205ENST00000475993 FAM9CQ8IZT9 166 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 SVOPQ8N4V2 548 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 SIMC1Q8NDZ2 872 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 DNERQ8NFT8 737 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 OR52K1Q8NGK4 314 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 CPB2Q96IY4 423 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 TWNKQ96RR1 684 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 LGMNQ99538 433 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 OMDQ99983 421 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 USB1Q9BQ65 265 aaKnown RBP10.52□□□□□ -0.72
ABCF1-205ENST00000475993 BDH2Q9BUT1 245 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 BCO2Q9BYV7 579 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 C2orf40Q9H1Z8 148 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 NTN4Q9HB63 628 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 CHST12Q9NRB3 414 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 KLF15Q9UIH9 416 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 DNMT3LQ9UJW3 386 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 NDUFAF1Q9Y375 327 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 PCDHB3Q9Y5E6 796 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 SNX5Q9Y5X3 404 aa10.52□□□□□ -0.72
ABCF1-205ENST00000475993 RIMBP2O15034 1052 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 DAB1O75553 588 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 KRT19P08727 400 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 ACTR2P61160 394 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 GHRHRQ02643 423 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 OLIG2Q13516 323 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 DAG1Q14118 895 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 USP10Q14694 798 aaKnown RBP10.52□□□□□ -0.73
ABCF1-205ENST00000475993 LAIR2Q6ISS4 152 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 LARP4Q71RC2 724 aaKnown RBP eCLIP10.52□□□□□ -0.734e-8■■■□□ 16.7
ABCF1-205ENST00000475993 STRADAQ7RTN6 431 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 GALNT12Q8IXK2 581 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 SMG8Q8ND04 991 aaKnown RBP10.52□□□□□ -0.73
ABCF1-205ENST00000475993 CERKQ8TCT0 537 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 CLEC4DQ8WXI8 215 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 AURKBQ96GD4 344 aaPredicted RBP10.52□□□□□ -0.73
ABCF1-205ENST00000475993 TOE1Q96GM8 510 aaKnown RBP10.52□□□□□ -0.73
ABCF1-205ENST00000475993 ZNF300Q96RE9 604 aaPredicted RBP10.52□□□□□ -0.73
ABCF1-205ENST00000475993 NODALQ96S42 347 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 ANKHQ9HCJ1 492 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 MRPL39Q9NYK5 338 aaKnown RBP10.52□□□□□ -0.73
ABCF1-205ENST00000475993 NPAP1Q9NZP6 1156 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 ZNF221Q9UK13 617 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 HCN4Q9Y3Q4 1203 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 PCDHGB1Q9Y5G3 927 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 PCDHA9Q9Y5H5 950 aa10.52□□□□□ -0.73
ABCF1-205ENST00000475993 A0A0X1KG70 313 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 UPK1AO00322 258 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 TSPAN4O14817 238 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 SHOXO15266 292 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 OR7A10O76100 309 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 MT-ND1P03886 318 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 YWHAQP27348 245 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 CDH8P55286 799 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 VBP1P61758 197 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 MEP1AQ16819 746 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 CTU2Q2VPK5 515 aaKnown RBP10.51□□□□□ -0.73
ABCF1-205ENST00000475993 UGT3A2Q3SY77 523 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 AGAP6Q5VW22 663 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 CYHR1Q6ZMK1 362 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 PAGE2Q7Z2X7 111 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 AFAP1L2Q8N4X5 818 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 SLAIN1Q8ND83 568 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 OR10Z1Q8NGY1 313 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 BPIFB1Q8TDL5 484 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 FAR1Q8WVX9 515 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 YIPF6Q96EC8 236 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 RPL10LQ96L21 214 aaKnown RBP10.51□□□□□ -0.73
ABCF1-205ENST00000475993 AGAP4Q96P64 663 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 CSPG4P5Q96PW8 444 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 POMKQ9H5K3 350 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 EPS8L2Q9H6S3 715 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 IFT22Q9H7X7 185 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 PAK1IP1Q9NWT1 392 aaPredicted RBP10.51□□□□□ -0.73
ABCF1-205ENST00000475993 MFHAS1Q9Y4C4 1052 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 A0A0J9YYE9 177 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 PRSS23O95084 383 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 TCF3P15923 654 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 MAGP20916 626 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 ALDH4A1P30038 563 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 ARHGDIAP52565 204 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 TNFAIP2Q03169 654 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 TOP3AQ13472 1001 aaPredicted RBP10.51□□□□□ -0.73
ABCF1-205ENST00000475993 CAPRIN1Q14444 709 aaKnown RBP10.51□□□□□ -0.73
ABCF1-205ENST00000475993 EMC2Q15006 297 aa10.51□□□□□ -0.73
ABCF1-205ENST00000475993 PGM5Q15124 567 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms