RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 C1orf226A1L170 272 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 FAM172BPA6NC97 362 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 J3KRW8 73 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 M0QZ24 198 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 CCNDBP1O95273 360 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 MLYCDO95822 493 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 CLEC3BP05452 202 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 PBX3P40426 434 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 CLCN3P51790 818 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 RPS3AP61247 264 aaKnown RBP6.21□□□□□ -1.42
SMC5-203ENST00000475540 ISL1P61371 349 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 PHEXP78562 749 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 RBBP5Q15291 538 aaKnown RBP6.21□□□□□ -1.42
SMC5-203ENST00000475540 MYLK3Q32MK0 819 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 GFI1BQ5VTD9 330 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 ASB18Q6ZVZ8 466 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 TRMT1LQ7Z2T5 733 aaKnown RBP6.21□□□□□ -1.42
SMC5-203ENST00000475540 SMIM29Q86T20 159 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 DCUN1D3Q8IWE4 304 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 FRMD1Q8N878 549 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 KBTBD3Q8NAB2 608 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 DMBX1Q8NFW5 382 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 THAP6Q8TBB0 222 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 NR4A3Q92570 626 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 SGCDQ92629 289 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 C7orf26Q96N11 449 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 UHRF2Q96PU4 802 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 PCYT2Q99447 389 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 MMP28Q9H239 520 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 SDF2L1Q9HCN8 221 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 OR2W1Q9Y3N9 320 aa6.21□□□□□ -1.42
SMC5-203ENST00000475540 FAM237BA0A1B0GVD1 139 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 FGF17O60258 216 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 WDR1O75083 606 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 PSMA4P25789 261 aaKnown RBP6.2□□□□□ -1.42
SMC5-203ENST00000475540 PRCPP42785 496 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 PITX1P78337 314 aaPredicted RBP6.2□□□□□ -1.42
SMC5-203ENST00000475540 ZBED6P86452 979 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 CEBPZQ03701 1054 aaKnown RBP6.2□□□□□ -1.42
SMC5-203ENST00000475540 ZNF234Q14588 700 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 CDONQ4KMG0 1287 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 C18orf63Q68DL7 685 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 CYP20A1Q6UW02 462 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 PAF1Q8N7H5 531 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 LRRC1Q9BTT6 524 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 TRMT61BQ9BVS5 477 aaKnown RBP6.2□□□□□ -1.42
SMC5-203ENST00000475540 EHD2Q9NZN4 543 aa6.2□□□□□ -1.42
SMC5-203ENST00000475540 P2RY10O00398 339 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 CAPN9O14815 690 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 KCNN4O15554 427 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 NDUFS3O75489 264 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 NFKBIAP25963 317 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 AMPHP49418 695 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 NAB2Q15742 525 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 PDSS1Q5T2R2 415 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 TMTC3Q6ZXV5 915 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 NRROSQ86YC3 692 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 OR5R1Q8NH85 324 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 TDRD7Q8NHU6 1098 aaKnown RBP6.19□□□□□ -1.42
SMC5-203ENST00000475540 PERPQ96FX8 193 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 NEURL2Q9BR09 285 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 SIL1Q9H173 461 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 POLR1BQ9H9Y6 1135 aa6.19□□□□□ -1.42
SMC5-203ENST00000475540 UBA2Q9UBT2 640 aaPredicted RBP6.19□□□□□ -1.42
SMC5-203ENST00000475540 A0A1W2PQF6 199 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 ZNHIT1O43257 154 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 SH3BP5O60239 455 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 EIF2S1P05198 315 aaKnown RBP6.18□□□□□ -1.42
SMC5-203ENST00000475540 SP1P08047 785 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 POLR2CP19387 275 aaPredicted RBP6.18□□□□□ -1.42
SMC5-203ENST00000475540 UBA7P41226 1012 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 APOBEC1P41238 236 aaKnown RBP6.18□□□□□ -1.42
SMC5-203ENST00000475540 MPP1Q00013 466 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 NIPAL4Q0D2K0 466 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 ADIPOQQ15848 244 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 MEX3BQ6ZN04 569 aaKnown RBP6.18□□□□□ -1.42
SMC5-203ENST00000475540 KCTD8Q6ZWB6 473 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 TMPRSS12Q86WS5 348 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 MAP7D3Q8IWC1 876 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 ACVR1CQ8NER5 493 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 LRRC8CQ8TDW0 803 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 ARHGEF2Q92974 986 aaKnown RBP6.18□□□□□ -1.42
SMC5-203ENST00000475540 WDFY2Q96P53 400 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 RRP7BPQ9NSQ0 103 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 DIAPH3Q9NSV4 1193 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 ZFP57Q9NU63 452 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 CWC15Q9P013 229 aaKnown RBP6.18□□□□□ -1.42
SMC5-203ENST00000475540 PADI3Q9ULW8 664 aa6.18□□□□□ -1.42
SMC5-203ENST00000475540 B4E171 279 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 DVL1O14640 695 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 ANOS1P23352 680 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 TSPAN7P41732 249 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 DVL1P1P54792 670 aaPredicted RBP6.17□□□□□ -1.42
SMC5-203ENST00000475540 CDC16Q13042 620 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 PDE1CQ14123 709 aaPredicted RBP6.17□□□□□ -1.42
SMC5-203ENST00000475540 PNLIPRP3Q17RR3 467 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 ZNF704Q6ZNC4 412 aaPredicted RBP6.17□□□□□ -1.42
SMC5-203ENST00000475540 SLC26A9Q7LBE3 791 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 NFE4Q86UQ8 179 aa6.17□□□□□ -1.42
SMC5-203ENST00000475540 ARHGAP12Q8IWW6 846 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms