RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 TRIM72Q6ZMU5 477 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 RNF207Q6ZRF8 634 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 C22orf34Q6ZV56 151 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 GPRIN3Q6ZVF9 776 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 OVCH2Q7RTZ1 564 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 KCNK18Q7Z418 384 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 CDKL3Q8IVW4 592 aaPredicted RBP5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 UBE2J2Q8N2K1 259 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 CLIP4Q8N3C7 705 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 ZNF366Q8N895 744 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 C11orf65Q8NCR3 313 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 LINC00116Q8NCU8 138 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 OR8K5Q8NH50 307 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 PPP1R35Q8TAP8 253 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 HM13Q8TCT9 377 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 SLC13A3Q8WWT9 602 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 PTP4A1Q93096 173 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 RADILQ96JH8 1075 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 BCL7BQ9BQE9 202 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 CLSTN3Q9BQT9 956 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 FSD1Q9BTV5 496 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 EFHD1Q9BUP0 239 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 SYNDIG1Q9H7V2 258 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 UFSP2Q9NUQ7 469 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 CMTM6Q9NX76 183 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 B3GNT2Q9NY97 397 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 MTMR4Q9NYA4 1195 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 HSPBP1Q9NZL4 362 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 TMOD2Q9NZR1 351 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 HMG20BQ9P0W2 317 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 SERPINB13Q9UIV8 391 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 SNX6Q9UNH7 406 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 GAB2Q9UQC2 676 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 PCDHA3Q9Y5H8 950 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 GPR45Q9Y5Y3 372 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 SPATA31A1Q5TZJ5 1347 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 EMSYQ7Z589 1322 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 TULP4Q9NRJ4 1543 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 LRP5O75197 1615 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 PLCH1Q4KWH8 1693 aa5.98□□□□□ -1.45
ECHDC1-215ENST00000475319 ABHD14A-ACY1A0A1B0GW23 586 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 WTIPA6NIX2 430 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CENPXA8MT69 81 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 PRR5-ARHGAP8B1AHC4 643 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 LINC00587B1AMM8 73 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 NT5C1B-RDH14C9J2C7 533 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CLDN25C9JDP6 229 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 KLRF2D3W0D1 207 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 H3BMM5 538 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 PSMD12O00232 456 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 PGRMC1O00264 195 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 MAN2B1O00754 1011 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 SCDO00767 359 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 AP3D1O14617 1153 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 TSPAN4O14817 238 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 NKRFO15226 690 aaKnown RBP eCLIP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ZNF185O15231 689 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CHMP2AO43633 222 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 NDUFS6O75380 124 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 HBQ1P09105 142 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 THEGLP0DJG4 465 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 T-ENOLP0DO92 83 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CYP11B1P15538 503 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 GNSP15586 552 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 PTPN1P18031 435 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ITGB5P18084 799 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 FGFR2P21802 821 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 KELP23276 732 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CMA1P23946 247 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 UGT2B10P36537 528 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 GSTM5P46439 218 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 YAP1P46937 504 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 BMXP51813 675 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 GTF2A2P52657 109 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 DGKQP52824 942 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 YWHAGP61981 247 aaKnown RBP eCLIP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 IL1RL1Q01638 556 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 PPARAQ07869 468 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 MN1Q10571 1320 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 TEFQ10587 303 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ST3GAL1Q11201 340 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ABRQ12979 859 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 RIN1Q13671 783 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 THOC5Q13769 683 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 MFSD13AQ14CX5 517 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 DLG2Q15700 870 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 NAB2Q15742 525 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 KYNUQ16719 465 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 SMTNL2Q2TAL5 461 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 IQCCQ4KMZ1 466 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ZMAT1Q5H9K5 638 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 UBE2UQ5VVX9 321 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 RSBN1Q5VWQ0 802 aaPredicted RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 KRT40Q6A162 431 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 ITPRIPL1Q6GPH6 555 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 UGT3A1Q6NUS8 523 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CCDC137Q6PK04 289 aaKnown RBP5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 PLEKHG7Q6ZR37 379 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 RFX8Q6ZV50 586 aa5.97□□□□□ -1.45
ECHDC1-215ENST00000475319 CBLL1Q75N03 491 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms