RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 ST7LQ8TDW4 575 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 TP53INP1Q96A56 240 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 ELP4Q96EB1 424 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 LINGO1Q96FE5 620 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SLC41A2Q96JW4 573 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 PTCHD1Q96NR3 888 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 OCSTAMPQ9BR26 566 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SYT17Q9BSW7 474 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 GPR87Q9BY21 358 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 MKRN2Q9H000 416 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 THAP2Q9H0W7 228 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 IGFLR1Q9H665 355 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SOX17Q9H6I2 414 aaPredicted RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 MMP25Q9NPA2 562 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.48□□□□□ -1.85
UBR3-208ENST00000474426 SLC24A2Q9UI40 661 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 POU2F3Q9UKI9 436 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 GABRQQ9UN88 632 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 KCNK7Q9Y2U2 307 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 SAMM50Q9Y512 469 aa3.48□□□□□ -1.85
UBR3-208ENST00000474426 MRPS18BQ9Y676 258 aaKnown RBP3.48□□□□□ -1.85
UBR3-208ENST00000474426 KIF21AQ7Z4S6 1674 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 BCL9O00512 1426 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 WDR62O43379 1518 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 A0A075B6Q4 140 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 EFCAB8A8MWE9 144 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 C3orf80F5H4A9 247 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 UBE2Q2LH0YL09 131 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CES2O00748 559 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GAS2O43903 313 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 ATP2C2O75185 946 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 UBXN7O94888 489 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 FCER2P06734 321 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 KLK3P07288 261 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 NR2C1P13056 603 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 TCF4P15884 667 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 YWHAQP27348 245 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 AVPR2P30518 371 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GCH1P30793 250 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SHMT2P34897 504 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CDKN2CP42773 168 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PRKAA2P54646 552 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ERVK-9P63128 1117 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 TUBB4BP68371 445 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 EGR3Q06889 387 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LRRC32Q14392 662 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LARS2Q15031 903 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 TRIP13Q15645 432 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 DUOXA2Q1HG44 320 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CERKLQ49MI3 558 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 SPATA46Q5T0L3 261 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SFRP5Q5T4F7 317 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 HEPHL1Q6MZM0 1159 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PET117Q6UWS5 81 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CATSPERDQ86XM0 798 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ARHGEF19Q8IW93 802 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 KBTBD2Q8IY47 623 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ABI1Q8IZP0 508 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 GPR161Q8N6U8 529 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 ZNF511Q8NB15 262 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CHST14Q8NCH0 376 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CKAP2Q8WWK9 683 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ST8SIA2Q92186 375 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LARP4BQ92615 738 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 FBXW5Q969U6 566 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LRRC37BQ96QE4 947 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LGMNQ99538 433 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CENPKQ9BS16 269 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 C17orf80Q9BSJ5 609 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SLC5A7Q9GZV3 580 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SAV1Q9H4B6 383 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 C17orf75Q9HAS0 396 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LRRC4Q9HBW1 653 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ZDHHC7Q9NXF8 308 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 BARHL2Q9NY43 387 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 RBAKQ9NYW8 714 aaPredicted RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 INTS6Q9UL03 887 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 MAU2Q9Y6X3 613 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 RAB3GAP2Q9H2M9 1393 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PRAG1Q86YV5 1406 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 PLB1Q6P1J6 1458 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 A0A0B4J293 547 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 WRBO00258 174 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ITGB1BP1O14713 200 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 ZNF263O14978 683 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 BUD23O43709 281 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 ZNF623O75123 536 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 MED6O75586 246 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 WFS1O76024 890 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 SCGB1D1O95968 90 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LDLRP01130 860 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 IGHV2-70P01814 119 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 IFNA16P05015 189 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CRHP06850 196 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 FAM228BP0C875 321 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 LAMP2P13473 410 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 NDUFB7P17568 137 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 EIF2AK2P19525 551 aaKnown RBP3.47□□□□□ -1.85
UBR3-208ENST00000474426 CD1BP29016 333 aa3.47□□□□□ -1.85
UBR3-208ENST00000474426 CRHR1P34998 444 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms