RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 VAV2P52735 878 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 ZNF235Q14590 738 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 LLGL1Q15334 1064 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 TMCO4Q5TGY1 634 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 RAET1GQ6H3X3 334 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 TRNP1Q6NT89 227 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 KRBA2Q6ZNG9 492 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 Q6ZS92 163 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 PARP9Q8IXQ6 854 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 ZBTB2Q8N680 514 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 EHBP1Q8NDI1 1231 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 TUBGCP5Q96RT8 1024 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 RETREG1Q9H6L5 497 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 GOLGA6AQ9NYA3 693 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 B4GALT6Q9UBX8 382 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 CNOT8Q9UFF9 292 aaKnown RBP12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 PCYT1BQ9Y5K3 369 aaPredicted RBP12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 GOLGA6L4A6NEF3 574 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 LILRA5A6NI73 299 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 LRIG2O94898 1065 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 SERPINA4P29622 427 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 FLT3P36888 993 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 PRCPP42785 496 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 PMS1P54277 932 aaKnown RBP12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 UBE2HP62256 183 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 NRG1Q02297 640 aaPredicted RBP12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 LRP8Q14114 963 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 CNGA3Q16281 694 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 RAB6CQ53S08 254 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 IZUMO3Q5VZ72 239 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 DENND2CQ68D51 928 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 TRIM74Q86UV6 250 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 GALNT13Q8IUC8 556 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 GRHL3Q8TE85 626 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 KLHL6Q8WZ60 621 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 MR1Q95460 341 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 RELTQ969Z4 430 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 DTD2Q96FN9 168 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 RAB6CQ9H0N0 254 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 ATP13A3Q9H7F0 1226 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 PDE7BQ9NP56 450 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 UBE2TQ9NPD8 197 aaPredicted RBP12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 TMEM51Q9NW97 253 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 CPNE7Q9UBL6 633 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 PCDHGC3Q9UN70 934 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 SNX7Q9UNH6 387 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 SLC30A1Q9Y6M5 507 aa12.54□□□□□ -0.4
PCYT1A-214ENST00000473978 PIKFYVEQ9Y2I7 2098 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 SOD1P00441 154 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 FOLR1P15328 257 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 TEAD1P28347 426 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 RRADP55042 308 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 CETN1Q12798 172 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 TUBB3Q13509 450 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 PRSS42Q7Z5A4 293 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 HSD11B1LQ7Z5J1 315 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 ZDHHC17Q8IUH5 632 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 CFAP57Q96MR6 1250 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 FCRL4Q96PJ5 515 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 TSG101Q99816 390 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 CHST8Q9H2A9 424 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 ZBTB20Q9HC78 741 aaPredicted RBP12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 RARRES3Q9UL19 164 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 PRKAB1Q9Y478 270 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 VPS13CQ709C8 3753 aa12.53□□□□□ -0.4
PCYT1A-214ENST00000473978 BECN2A8MW95 431 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 TRAFD1O14545 582 aaPredicted RBP12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 P4HA2O15460 535 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 SNX2O60749 519 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 UBXN7O94888 489 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 NELFEP18615 380 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 ADRA1BP35368 520 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 SNX16P57768 344 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 POLR2LP62875 67 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 PDE1BQ01064 536 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 GPS2Q13227 327 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 ATP1A4Q13733 1029 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 KCNAB1Q14722 419 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 COBLL1Q53SF7 1204 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 CACHD1Q5VU97 1274 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 LCN10Q6JVE6 187 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 DUS1LQ6P1R4 473 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 FAM92BQ6ZTR7 304 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 Q6ZVL8 140 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 CHST15Q7LFX5 561 aaPredicted RBP12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 MRGPRGQ86SM5 289 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 SRLQ86TD4 932 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 ZADH2Q8N4Q0 377 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 PAF1Q8N7H5 531 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 ENDOVQ8N8Q3 282 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 FAR1Q8WVX9 515 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 TBC1D31Q96DN5 1066 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 SGSM3Q96HU1 749 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 HERPUD2Q9BSE4 406 aa12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 ZNF552Q9H707 407 aaPredicted RBP12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 UBA2Q9UBT2 640 aaPredicted RBP12.52□□□□□ -0.41
PCYT1A-214ENST00000473978 AJAP1Q9UKB5 411 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms