RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 PRMT5O14744 637 aaPredicted RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 PLIN3O60664 434 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 VPS26AO75436 327 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 KLHL2O95198 593 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 FAM107AO95990 144 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SLC35E2BP0CK96 405 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SRFP11831 508 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 NEFHP12036 1026 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 ADRB3P13945 408 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 PKMP14618 531 aaKnown RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SAT1P21673 171 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 C5AR1P21730 350 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 FDXRP22570 491 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 ACRV1P26436 265 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SKIV2L2P42285 1042 aaKnown RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SERPINB4P48594 390 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SFSWAPQ12872 951 aaKnown RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 RALGDSQ12967 914 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 PTPRRQ15256 657 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 ZNF789Q5FWF6 425 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 RBM20Q5T481 1227 aaKnown RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 N4BP2L1Q5TBK1 243 aaPredicted RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 AGAP9Q5VTM2 703 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 ZNF776Q68DI1 518 aaPredicted RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 LIPIQ6XZB0 460 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 CDHR3Q6ZTQ4 885 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 ERN2Q76MJ5 926 aaKnown RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 ZNF765Q7L2R6 523 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 CYP2U1Q7Z449 544 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 LDB1Q86U70 411 aaPredicted RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SERPINA9Q86WD7 417 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SFTPA1Q8IWL2 248 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 PIANPQ8IYJ0 282 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 NXPE1Q8N323 547 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 CCDC63Q8NA47 563 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 GPR26Q8NDV2 337 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 ARRDC3Q96B67 414 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 ZSCAN5AQ9BUG6 496 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 CLPBQ9H078 707 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 FAM83DQ9H4H8 585 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 GPAMQ9HCL2 828 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 FBRSL1Q9HCM7 1045 aaKnown RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 MLXIPLQ9NP71 852 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SMOXQ9NWM0 555 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.75□□□□□ -0.37
VPS13D-205ENST00000473099 GNPTGQ9UJJ9 305 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SARDHQ9UL12 918 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 HCN2Q9UL51 889 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 SCML1Q9UN30 329 aa12.75□□□□□ -0.37
VPS13D-205ENST00000473099 A8MX80 341 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 MAN2B1O00754 1011 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 KLF11O14901 512 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 AREL1O15033 823 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 PHGDHO43175 533 aaKnown RBP12.74□□□□□ -0.37
VPS13D-205ENST00000473099 AP1G1O43747 822 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 H2AFYO75367 372 aaKnown RBP12.74□□□□□ -0.37
VPS13D-205ENST00000473099 PROCP04070 461 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 LTA4HP09960 611 aaKnown RBP12.74□□□□□ -0.37
VPS13D-205ENST00000473099 TIE1P35590 1138 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 NSG1P42857 185 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 PSMD8P48556 350 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 PRKAA2P54646 552 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 SATB1Q01826 763 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 PDAP1Q13442 181 aaKnown RBP12.74□□□□□ -0.37
VPS13D-205ENST00000473099 TDGQ13569 410 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 PON2Q15165 354 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 CHRNA6Q15825 494 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 CST6Q15828 149 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 ZNF284Q2VY69 593 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 TMEM52BQ4KMG9 183 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 PPM1JQ5JR12 505 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 ATG16L1Q676U5 607 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 PTCRAQ6ISU1 281 aaPredicted RBP12.74□□□□□ -0.37
VPS13D-205ENST00000473099 TXNDC11Q6PKC3 985 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 CPLX4Q7Z7G2 160 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 MMAAQ8IVH4 418 aaKnown RBP12.74□□□□□ -0.37
VPS13D-205ENST00000473099 CEP97Q8IW35 865 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 TRAM1L1Q8N609 369 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 ARMC2Q8NEN0 867 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 OR2T3Q8NH03 318 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 KCNJ9Q92806 393 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 GRAMD1AQ96CP6 724 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 ZNF317Q96PQ6 595 aaPredicted RBP12.74□□□□□ -0.37
VPS13D-205ENST00000473099 ACOX2Q99424 681 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 NDNQ99608 321 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 NMRAL1Q9HBL8 299 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 PRDM6Q9NQX0 595 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 HEBP1Q9NRV9 189 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 ZDHHC3Q9NYG2 299 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 FNDC3AQ9Y2H6 1198 aaKnown RBP12.74□□□□□ -0.37
VPS13D-205ENST00000473099 MUC3AQ02505 3323 aa12.74□□□□□ -0.37
VPS13D-205ENST00000473099 CFAP99D6REC4 459 aa12.73□□□□□ -0.37
VPS13D-205ENST00000473099 E5RI56 91 aa12.73□□□□□ -0.37
VPS13D-205ENST00000473099 QSOX1O00391 747 aa12.73□□□□□ -0.37
VPS13D-205ENST00000473099 WNT9AO14904 365 aa12.73□□□□□ -0.37
VPS13D-205ENST00000473099 TSPAN6O43657 245 aa12.73□□□□□ -0.37
VPS13D-205ENST00000473099 RHOBTB1O94844 696 aa12.73□□□□□ -0.37
VPS13D-205ENST00000473099 WISP3O95389 354 aaPredicted RBP12.73□□□□□ -0.37
VPS13D-205ENST00000473099 EGFP01133 1207 aa12.73□□□□□ -0.37
VPS13D-205ENST00000473099 BPGMP07738 259 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms