RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 KCNK4Q9NYG8 393 aa22.37■■□□□ 1.17
C9orf3-213ENST00000471978 FOXJ2Q9P0K8 574 aa22.37■■□□□ 1.17
C9orf3-213ENST00000471978 VPS18Q9P253 973 aa22.37■■□□□ 1.17
C9orf3-213ENST00000471978 PRKAB1Q9Y478 270 aa22.37■■□□□ 1.17
C9orf3-213ENST00000471978 OAS3Q9Y6K5 1087 aaKnown RBP22.37■■□□□ 1.17
C9orf3-213ENST00000471978 TRBV23OR9-2A0A075B6M9 112 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 IGHV1OR21-1A0A087WYE8 117 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 RGSL1A5PLK6 1076 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 C9orf172C9J069 976 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 APOL1O14791 398 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 HGSO14964 777 aaPredicted RBP22.36■■□□□ 1.17
C9orf3-213ENST00000471978 DNAJC6O75061 913 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 MFAP3LO75121 409 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 MTA2O94776 668 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 LY6DQ14210 128 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 GALNT3Q14435 633 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 PDK1Q15118 436 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 FAM182AQ5T1J6 154 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 HENMT1Q5T8I9 393 aaKnown RBP22.36■■□□□ 1.17
C9orf3-213ENST00000471978 ZFAND4Q86XD8 727 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 RHOT2Q8IXI1 618 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 CCDC74BQ96LY2 380 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 CEP41Q9BYV8 373 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 SEPT10Q9P0V9 454 aa22.36■■□□□ 1.17
C9orf3-213ENST00000471978 PCYT1BQ9Y5K3 369 aaPredicted RBP22.36■■□□□ 1.17
C9orf3-213ENST00000471978 FADS2P1A8MWK0 482 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 KRT1P04264 644 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 CCL4P13236 92 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 ZFXP17010 805 aaPredicted RBP22.35■■□□□ 1.17
C9orf3-213ENST00000471978 LIMK2P53671 638 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 ODF2Q5BJF6 829 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 TMEM164Q5U3C3 297 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 NPNTQ6UXI9 565 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 CHST15Q7LFX5 561 aaPredicted RBP22.35■■□□□ 1.17
C9orf3-213ENST00000471978 KDELC2Q7Z4H8 507 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 ZNF605Q86T29 641 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 OR4D9Q8NGE8 314 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 SLC37A2Q8TED4 501 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 AGAP3Q96P47 875 aa22.35■■□□□ 1.17
C9orf3-213ENST00000471978 PPP1R12AO14974 1030 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-213ENST00000471978 EML2O95834 649 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 FASLGP48023 281 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 SRSF6Q13247 344 aaKnown RBP22.34■■□□□ 1.17
C9orf3-213ENST00000471978 SQSTM1Q13501 440 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 TRA2AQ13595 282 aaKnown RBP eCLIP22.34■■□□□ 1.17
C9orf3-213ENST00000471978 LRRC38Q5VT99 294 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 LYSMD3Q7Z3D4 306 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 NT5DC3Q86UY8 548 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 RFX6Q8HWS3 928 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 SFRP1Q8N474 314 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 RNF25Q96BH1 459 aaPredicted RBP22.34■■□□□ 1.17
C9orf3-213ENST00000471978 IMP4Q96G21 291 aaKnown RBP22.34■■□□□ 1.17
C9orf3-213ENST00000471978 OLFM3Q96PB7 478 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 DPYSL5Q9BPU6 564 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 SEMA4CQ9C0C4 833 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 B3GNT4Q9C0J1 378 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 RMI1Q9H9A7 625 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 ZFYVE1Q9HBF4 777 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 PCDHB11Q9Y5F2 797 aa22.34■■□□□ 1.17
C9orf3-213ENST00000471978 TNNT1P13805 278 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 MPSTP25325 297 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 CD82P27701 267 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 CSF2RBP32927 897 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 PPM1FP49593 454 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-213ENST00000471978 DYNLT1P63172 113 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 GPLD1P80108 840 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 MANEAQ5SRI9 462 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 ZNF761Q86XN6 746 aaPredicted RBP22.33■■□□□ 1.17
C9orf3-213ENST00000471978 RHOT1Q8IXI2 618 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 EID2BQ96D98 161 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 AHCYL2Q96HN2 611 aaKnown RBP22.33■■□□□ 1.17
C9orf3-213ENST00000471978 TRIB3Q96RU7 358 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 SLC38A3Q99624 504 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 ZMYND15Q9H091 742 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 SLC25A51Q9H1U9 297 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 TSPY26PQ9H489 355 aa22.33■■□□□ 1.17
C9orf3-213ENST00000471978 DDX56Q9NY93 547 aaKnown RBP22.33■■□□□ 1.17
C9orf3-213ENST00000471978 PIRTP0C851 137 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 THRAP10827 490 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 FGF3P11487 239 aaPredicted RBP22.32■■□□□ 1.16
C9orf3-213ENST00000471978 ACP5P13686 325 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 SLC1A1P43005 524 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 PCSK7Q16549 785 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 B4GALNT4Q76KP1 1039 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 VASH2Q86V25 355 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 DTX1Q86Y01 620 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 RNF214Q8ND24 703 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 AGBL5Q8NDL9 886 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 SGF29Q96ES7 293 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 TAAR9Q96RI9 348 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 ANP32EQ9BTT0 268 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 SPATA16Q9BXB7 569 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 BRD8Q9H0E9 1235 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 TMEM9Q9P0T7 183 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 TBC1D29Q9UFV1 150 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 SHOC2Q9UQ13 582 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 KCNK6Q9Y257 313 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 HYOU1Q9Y4L1 999 aa22.32■■□□□ 1.16
C9orf3-213ENST00000471978 ZFC3H1O60293 1989 aaKnown RBP22.31■■□□□ 1.16
C9orf3-213ENST00000471978 CSTF2P33240 577 aaKnown RBP eCLIP22.31■■□□□ 1.161e-6■■■□□ 15.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms