RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TRNAU1APQ9NX07 287 aaKnown RBP15.17■□□□□ 0.02
SDC3-203ENST00000471567 NCKIPSDQ9NZQ3 722 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 SUFUQ9UMX1 484 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 APOBEC2Q9Y235 224 aaKnown RBP15.17■□□□□ 0.02
SDC3-203ENST00000471567 CACNA1AO00555 2505 aa15.17■□□□□ 0.02
SDC3-203ENST00000471567 GLYATL1P3A0A0U1RQE8 302 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 GPR89AB7ZAQ6 455 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 AP3B1O00203 1094 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 YY2O15391 372 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 LDB2O43679 373 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 BUD23O43709 281 aaKnown RBP15.16■□□□□ 0.02
SDC3-203ENST00000471567 SLC25A14O95258 325 aaPredicted RBP15.16■□□□□ 0.02
SDC3-203ENST00000471567 ASMTLO95671 621 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 KRT14P02533 472 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 FUCA1P04066 466 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 APRTP07741 180 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 GPR89BP0CG08 455 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 CKMT2P17540 419 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 TPH1P17752 444 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 HADHAP40939 763 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 POLD2P49005 469 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 ETF1P62495 437 aaKnown RBP15.16■□□□□ 0.02
SDC3-203ENST00000471567 CDK16Q00536 496 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 LAMB3Q13751 1172 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 DOK6Q6PKX4 331 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 PPP1R21Q6ZMI0 780 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 TRIM74Q86UV6 250 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 PHYKPLQ8IUZ5 450 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 C17orf53Q8N3J3 647 aaPredicted RBP15.16■□□□□ 0.02
SDC3-203ENST00000471567 DNAAF3Q8N9W5 541 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 OR4K2Q8NGD2 314 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 OR52K1Q8NGK4 314 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 TMEM168Q9H0V1 697 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 TRIM39Q9HCM9 518 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 CASS4Q9NQ75 786 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 EVA1BQ9NVM1 165 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 APPL1Q9UKG1 709 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 DOLKQ9UPQ8 538 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 TMEM98Q9Y2Y6 226 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 PCDHGA1Q9Y5H4 931 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 DCHS1Q96JQ0 3298 aa15.16■□□□□ 0.02
SDC3-203ENST00000471567 LRP4O75096 1905 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 DKK1O94907 266 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 TRIM16O95361 564 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 ADRB1P08588 477 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 FTH1P19P0C7X4 201 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 CDK4P11802 303 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 PAFAH1B1P43034 410 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 GNPDA1P46926 289 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 DUSP3P51452 185 aaPredicted RBP15.15■□□□□ 0.02
SDC3-203ENST00000471567 ZNF140P52738 457 aaPredicted RBP15.15■□□□□ 0.02
SDC3-203ENST00000471567 BASP1P80723 227 aaKnown RBP15.15■□□□□ 0.02
SDC3-203ENST00000471567 FOXK2Q01167 660 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 ITGA9Q13797 1035 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 CHRNA6Q15825 494 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 DEFB133Q30KQ1 61 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 ATP13A5Q4VNC0 1218 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 PYCR3Q53H96 274 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 C6orf132Q5T0Z8 1188 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 GPBAR1Q8TDU6 330 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 STYXQ8WUJ0 223 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 GLMNQ92990 594 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 APOLD1Q96LR9 279 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 OR2M4Q96R27 311 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 BOCQ9BWV1 1114 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 GSDMCQ9BYG8 508 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 TOR4AQ9NXH8 423 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 NEU2Q9Y3R4 380 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 KCTD3Q9Y597 815 aa15.15■□□□□ 0.02
SDC3-203ENST00000471567 OAS3Q9Y6K5 1087 aaKnown RBP15.15■□□□□ 0.02
SDC3-203ENST00000471567 GAPDHSO14556 408 aaPredicted RBP15.14■□□□□ 0.01
SDC3-203ENST00000471567 FANCGO15287 622 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 VEGFDO43915 354 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 NUAK1O60285 661 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 DNAJC6O75061 913 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 CELA2BP08218 269 aaPredicted RBP15.14■□□□□ 0.01
SDC3-203ENST00000471567 CKMT1AP12532 417 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 TPSB2P20231 275 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 ACP1P24666 158 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 PSMA3P25788 255 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 CASQ1P31415 396 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 ADCY8P40145 1251 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 MAGEA6P43360 314 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 ILF3Q12906 894 aaKnown RBP eCLIP15.14■□□□□ 0.01
SDC3-203ENST00000471567 GPS1Q13098 491 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 ILKQ13418 452 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 PEX6Q13608 980 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 LRP8Q14114 963 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 PTPRCAPQ14761 206 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 POU6F1Q14863 301 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 TPSAB1Q15661 275 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 FAM151BQ6UXP7 276 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 TAF8Q7Z7C8 310 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 SLCO6A1Q86UG4 719 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 GALNT13Q8IUC8 556 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 ZNF398Q8TD17 642 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 PTCD2Q8WV60 388 aaKnown RBP15.14■□□□□ 0.01
SDC3-203ENST00000471567 SLCO2A1Q92959 643 aa15.14■□□□□ 0.01
SDC3-203ENST00000471567 CAPZA3Q96KX2 299 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms