RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 KIF26AQ9ULI4 1882 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 WASH3PC4AMC7 463 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 E7EVH7 732 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 NPC1O15118 1278 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 INSIG1O15503 277 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 RIPK2O43353 540 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 HTRA2O43464 458 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 NEBLO76041 1014 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 TMEM63AO94886 807 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 CSPG5O95196 566 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 PAPSS2O95340 614 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 CYP17A1P05093 508 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 HLA-DQB2P05538 268 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 ATP5BP06576 529 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 MMP2P08253 660 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 SERPINF2P08697 491 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 HLA-DPA1P20036 260 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 HSD17B3P37058 310 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 NNMTP40261 264 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 VIPR2P41587 438 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 VPS41P49754 854 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 SERPINH1P50454 418 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 RPL26P61254 145 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 AP1S1P61966 158 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 NIPAL4Q0D2K0 466 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 CDH17Q12864 832 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 ILF2Q12905 390 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 STAT4Q14765 748 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 UAP1Q16222 522 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 LEXMQ3ZCV2 418 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 PLEKHN1Q494U1 663 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 CCDC38Q502W7 563 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 PITRM1Q5JRX3 1037 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 FNBP1LQ5T0N5 605 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 ANKRD22Q5VYY1 191 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 NCEH1Q6PIU2 408 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 TPGS1Q6ZTW0 290 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 B4GALNT4Q76KP1 1039 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 GET4Q7L5D6 327 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 TMEM135Q86UB9 458 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 ADIPOR2Q86V24 386 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 CIR1Q86X95 450 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 TDRPQ86YL5 185 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 RAVER1Q8IY67 606 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 APCDD1Q8J025 514 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 PGBD5Q8N414 524 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 CPA6Q8N4T0 437 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 SH2D3CQ8N5H7 860 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 PCDH20Q8N6Y1 951 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 NETO2Q8NC67 525 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 WFDC5Q8TCV5 224 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 PYROXD1Q8WU10 500 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 ING5Q8WYH8 240 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 MSANTD3Q96H12 275 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 OXNAD1Q96HP4 312 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 LRIG1Q96JA1 1093 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 FEM1CQ96JP0 617 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 AGAP3Q96P47 875 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 TUBGCP5Q96RT8 1024 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 CDX2Q99626 313 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 EBNA1BP2Q99848 306 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 CCDC77Q9BR77 488 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 MLPHQ9BV36 600 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 TRMT61BQ9BVS5 477 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 KIFC1Q9BW19 673 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 PHF7Q9BWX1 381 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 PLA2G2FQ9BZM2 168 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 IL22Q9GZX6 179 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 CDC42EP4Q9H3Q1 356 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 SEMA4AQ9H3S1 761 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 C8orf33Q9H7E9 229 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 UBE2ZQ9H832 354 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 HPS4Q9NQG7 708 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 BFARQ9NZS9 450 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 VPS51Q9UID3 782 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 GGA2Q9UJY4 613 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 VPS28Q9UK41 221 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 CLEC4EQ9ULY5 219 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 RPL26L1Q9UNX3 145 aaKnown RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 USP15Q9Y4E8 981 aaPredicted RBP5.52□□□□□ -1.53
VPS41-211ENST00000466017 WNT6Q9Y6F9 365 aa5.52□□□□□ -1.53
VPS41-211ENST00000466017 DENND4AQ7Z401 1863 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 NYNRINQ9P2P1 1898 aaKnown RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 SHROOM3Q8TF72 1996 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 CEP290O15078 2479 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 MYOFQ9NZM1 2061 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 A0A087WUV0 522 aaPredicted RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 FAM237BA0A1B0GVD1 139 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 A0A1W2PQU0 124 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 NEDD8-MDP1E9PL57 170 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 AGPSO00116 658 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 CBX4O00257 560 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 MUSKO15146 869 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SNAP91O60641 907 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 SOCS5O75159 536 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 TULP3O75386 442 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ZNF821O75541 412 aaPredicted RBP5.51□□□□□ -1.53
VPS41-211ENST00000466017 FAM155BO75949 473 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 USP1O94782 785 aa5.51□□□□□ -1.53
VPS41-211ENST00000466017 ALDH1A2O94788 518 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms