RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 ACSS2Q9NR19 701 aa11.48□□□□□ -0.57
TNRC6A-205ENST00000464539 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.48□□□□□ -0.57
TNRC6A-205ENST00000464539 FAM118AQ9NWS6 357 aa11.48□□□□□ -0.57
TNRC6A-205ENST00000464539 MAFBQ9Y5Q3 323 aaPredicted RBP11.48□□□□□ -0.57
TNRC6A-205ENST00000464539 A3GALT2U3KPV4 340 aa11.48□□□□□ -0.57
TNRC6A-205ENST00000464539 TTC28Q96AY4 2481 aa11.48□□□□□ -0.57
TNRC6A-205ENST00000464539 DOCK3Q8IZD9 2030 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 SYCE1LA8MT33 242 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 RAD51BO15315 384 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 MTSS1O43312 755 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 DAB1O75553 588 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 IPO13O94829 963 aaKnown RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 NPPAP01160 153 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 PFKMP08237 780 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 RBP1P09455 135 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 HNRNPLP14866 589 aaKnown RBP eCLIP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 ENDOUP21128 410 aaKnown RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 MZF1P28698 734 aaPredicted RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 NR4A2P43354 598 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 MRPL19P49406 292 aaKnown RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 GSK3BP49841 420 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 TPD52P55327 224 aaPredicted RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 COPZ1P61923 177 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 TUBA1BP68363 451 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 CLCQ05315 142 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 INCA1Q0VD86 236 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 PAFAH1B3Q15102 231 aaKnown RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 PPP1R3AQ16821 1122 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 KCTD11Q693B1 232 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 TBPL2Q6SJ96 375 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 TMC5Q6UXY8 1006 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 TUBA1AQ71U36 451 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 PDZD4Q76G19 769 aaPredicted RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 BEND5Q7L4P6 421 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 STRADAQ7RTN6 431 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 DCP1BQ8IZD4 617 aaKnown RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 CLIP4Q8N3C7 705 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 SPERTQ8NA61 448 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 ANKK1Q8NFD2 765 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 SUN5Q8TC36 379 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 RORBQ92753 470 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 TMEM125Q96AQ2 219 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 SDCCAG3Q96C92 435 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 YIPF6Q96EC8 236 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 KCTD14Q9BQ13 255 aaPredicted RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 KIFC1Q9BW19 673 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 MMP27Q9H306 513 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 TTYH1Q9H313 450 aaPredicted RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 DSN1Q9H410 356 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 ALG2Q9H553 416 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 SOX17Q9H6I2 414 aaPredicted RBP11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 PCDH12Q9NPG4 1184 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 USE1Q9NZ43 259 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 TSPAN16Q9UKR8 245 aa11.47□□□□□ -0.57
TNRC6A-205ENST00000464539 A8MU76 341 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 H0Y626 953 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 FXYD1O00168 92 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 CCNKO75909 580 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 TRIM16O95361 564 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 NR3C2P08235 984 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 HTR1AP08908 422 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 M6PRP20645 277 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 RYKP34925 604 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 NDST1P52848 882 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 POU4F1Q01851 419 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 CACNB2Q08289 660 aaPredicted RBP11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 CAPSQ13938 189 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 SHHQ15465 462 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 FAM83EQ2M2I3 478 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 DPY19L1Q2PZI1 675 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 KIF19Q2TAC6 998 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 ADPRMQ3LIE5 342 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 LHX8Q68G74 356 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 ZNF544Q6NX49 715 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 PRR23BQ6ZRT6 265 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 CLYBLQ8N0X4 340 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 POC5Q8NA72 575 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 PJA1Q8NG27 643 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 GRPEL2Q8TAA5 225 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 TTC9Q92623 222 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 GLMNQ92990 594 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 BIRC7Q96CA5 298 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 PIWIL1Q96J94 861 aaKnown RBP11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 CDK5RAP1Q96SZ6 601 aaKnown RBP11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 DGCR6LQ9BY27 220 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 TM9SF3Q9HD45 589 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 CHRAC1Q9NRG0 131 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 TMEM45AQ9NWC5 275 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 KLHL8Q9P2G9 620 aaPredicted RBP11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 GMPR2Q9P2T1 348 aaKnown RBP11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 ZNF221Q9UK13 617 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 TRHDEQ9UKU6 1024 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 DOCK1Q14185 1865 aa11.46□□□□□ -0.57
TNRC6A-205ENST00000464539 F5H423 210 aaPredicted RBP11.46□□□□□ -0.58
TNRC6A-205ENST00000464539 NR5A2O00482 541 aa11.46□□□□□ -0.58
TNRC6A-205ENST00000464539 TOR1BO14657 336 aa11.46□□□□□ -0.58
TNRC6A-205ENST00000464539 NCAM2O15394 837 aa11.46□□□□□ -0.58
TNRC6A-205ENST00000464539 VPS4BO75351 444 aa11.46□□□□□ -0.58
TNRC6A-205ENST00000464539 AHSGP02765 367 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms