RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 SPATA16Q9BXB7 569 aa12.22□□□□□ -0.45
RPA3-206ENST00000463632 TDRD1Q9BXT4 1180 aaKnown RBP12.22□□□□□ -0.45
RPA3-206ENST00000463632 FAM83DQ9H4H8 585 aa12.22□□□□□ -0.45
RPA3-206ENST00000463632 ARFGAP3Q9NP61 516 aa12.22□□□□□ -0.45
RPA3-206ENST00000463632 GEMIN8Q9NWZ8 242 aaKnown RBP12.22□□□□□ -0.45
RPA3-206ENST00000463632 RCOR3Q9P2K3 495 aaPredicted RBP12.22□□□□□ -0.45
RPA3-206ENST00000463632 TBC1D29Q9UFV1 150 aa12.22□□□□□ -0.45
RPA3-206ENST00000463632 PPIL1Q9Y3C6 166 aa12.22□□□□□ -0.45
RPA3-206ENST00000463632 PCDHGA3Q9Y5H0 932 aa12.22□□□□□ -0.45
RPA3-206ENST00000463632 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.21□□□□□ -0.45
RPA3-206ENST00000463632 SUV39H1O43463 412 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 EML2O95834 649 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 JCHAINP01591 159 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 ITGB6P18564 788 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 MX2P20592 715 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 CD86P42081 329 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 POLE2P56282 527 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 UBASH3AP57075 661 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 FOXM1Q08050 763 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 NIPAL4Q0D2K0 466 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 GALNT2Q10471 571 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 KCNAB2Q13303 367 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 DPYSL3Q14195 570 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 KIF26BQ2KJY2 2108 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 PLA2G4EQ3MJ16 856 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 ODF2Q5BJF6 829 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 C16orf46Q6P387 395 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 ALKBH5Q6P6C2 394 aaKnown RBP12.21□□□□□ -0.45
RPA3-206ENST00000463632 CRTC3Q6UUV7 619 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 CEACAM20Q6UY09 585 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 LYSMD3Q7Z3D4 306 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 NLGN4XQ8N0W4 816 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 SFRP1Q8N474 314 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 NLGN4YQ8NFZ3 816 aaPredicted RBP12.21□□□□□ -0.45
RPA3-206ENST00000463632 ZNF564Q8TBZ8 553 aaPredicted RBP12.21□□□□□ -0.45
RPA3-206ENST00000463632 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.21□□□□□ -0.45
RPA3-206ENST00000463632 SCARF2Q96GP6 870 aaPredicted RBP12.21□□□□□ -0.45
RPA3-206ENST00000463632 TEFMQ96QE5 360 aaKnown RBP12.21□□□□□ -0.45
RPA3-206ENST00000463632 FUCA2Q9BTY2 467 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 SLC12A9Q9BXP2 914 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 ADGRE3Q9BY15 652 aa12.21□□□□□ -0.45
RPA3-206ENST00000463632 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.21□□□□□ -0.45
RPA3-206ENST00000463632 OAS3Q9Y6K5 1087 aaKnown RBP12.21□□□□□ -0.45
RPA3-206ENST00000463632 A0A087X0T9 212 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 PDZK1P1A8MUH7 402 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 B4E171 279 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 GOLGA6L19H0YKK7 550 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 KCNK1O00180 336 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 POLR1CO15160 346 aaPredicted RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 NKX2-8O15522 239 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 GRID2O43424 1007 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 FZD6O60353 706 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 CYP1A2P05177 515 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 HLA-DQB2P05538 268 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 FAM228BP0C875 321 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 AMD1P17707 334 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 IL4RP24394 825 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 CCNCP24863 283 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 MAP4P27816 1152 aaKnown RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 TSPAN7P41732 249 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 FASLGP48023 281 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 SPINT3P49223 89 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 RPL26P61254 145 aaKnown RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 FANCCQ00597 558 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 GBE1Q04446 702 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 TLE1Q04724 770 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 SQSTM1Q13501 440 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 GALNT3Q14435 633 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 NR1I3Q14994 352 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 PAFAH1B3Q15102 231 aaKnown RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 PDK2Q15119 407 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 PCSK7Q16549 785 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 ZNF648Q5T619 568 aaPredicted RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 IYDQ6PHW0 289 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 CCDC13Q8IYE1 715 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 MAML1Q92585 1016 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 COX14Q96I36 57 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 CATSPER2Q96P56 530 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 HERPUD2Q9BSE4 406 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 EFHD1Q9BUP0 239 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 MAK16Q9BXY0 300 aaKnown RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 OR2AG1Q9H205 316 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 ADNPQ9H2P0 1102 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 SARS2Q9NP81 518 aaKnown RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 PRDM8Q9NQV8 689 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 ZNF71Q9NQZ8 489 aaPredicted RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 KLC4Q9NSK0 619 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 VPS18Q9P253 973 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 RPL26L1Q9UNX3 145 aaKnown RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 SHOC2Q9UQ13 582 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 DNAJC16Q9Y2G8 782 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 LUC7L2Q9Y383 392 aaKnown RBP12.2□□□□□ -0.46
RPA3-206ENST00000463632 HEY1Q9Y5J3 304 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 AHCTF1Q8WYP5 2266 aa12.2□□□□□ -0.46
RPA3-206ENST00000463632 CHD5Q8TDI0 1954 aa12.19□□□□□ -0.46
RPA3-206ENST00000463632 KIR2DS5A0A0G2JLQ3 304 aa12.19□□□□□ -0.46
RPA3-206ENST00000463632 A0A0G2JNG1 304 aa12.19□□□□□ -0.46
RPA3-206ENST00000463632 FADS2P1A8MWK0 482 aa12.19□□□□□ -0.46
RPA3-206ENST00000463632 KIR2DS3K7RE56 304 aa12.19□□□□□ -0.46
RPA3-206ENST00000463632 CAPN5O15484 640 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms