RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 CYTH4Q9UIA0 394 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 NOCTQ9UK39 431 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CAPN11Q9UMQ6 739 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 NENFQ9UMX5 172 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 PCDHB1Q9Y5F3 818 aa3.76□□□□□ -1.81
SCFD1-204ENST00000463622 TDRD15B5MCY1 1934 aaKnown RBP3.76□□□□□ -1.81
SCFD1-204ENST00000463622 CELSR3Q9NYQ7 3312 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 KLHL33A6NCF5 533 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 LRRC3CA6NJW4 275 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 EIF4E1BA6NMX2 242 aaKnown RBP3.75□□□□□ -1.81
SCFD1-204ENST00000463622 USP27XA6NNY8 438 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 CYB561D2O14569 222 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 GJB3O75712 270 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 SOAT2O75908 522 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 BEST1O76090 585 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 MATN4O95460 622 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 PRAMEF12O95522 483 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 FGF19O95750 216 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 PDGFRBP09619 1106 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 CCDC130P13994 396 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 PLA2G2AP14555 144 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 ENGP17813 658 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 TRIM21P19474 475 aaKnown RBP3.75□□□□□ -1.81
SCFD1-204ENST00000463622 FBLP22087 321 aaKnown RBP3.75□□□□□ -1.81
SCFD1-204ENST00000463622 HOXD12P35452 270 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 P2RY2P41231 377 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 DPP6P42658 865 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 NDST1P52848 882 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 ARPP19P56211 112 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 FMO1Q01740 532 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 GPR17Q13304 367 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 SLC14A1Q13336 389 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 PLD1Q13393 1074 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 TRPC3Q13507 836 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 TRIP6Q15654 476 aaKnown RBP3.75□□□□□ -1.81
SCFD1-204ENST00000463622 ASTE1Q2TB18 679 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-204ENST00000463622 FILIP1LQ4L180 1135 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 C2CD6Q53TS8 623 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 ZNF667Q5HYK9 610 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 TAF3Q5VWG9 929 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 DENND1BQ6P3S1 775 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 TMEM270Q6UE05 265 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 PAQR9Q6ZVX9 377 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 GLRX5Q86SX6 157 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 ACOT1Q86TX2 421 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 LURAP1LQ8IV03 231 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 FAM71AQ8IYT1 594 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 LRRC52Q8N7C0 313 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 ANKRD20A12PQ8NF67 263 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 NEK11Q8NG66 645 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 PIGKQ92643 395 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 HDAC10Q969S8 669 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 PSMG2Q969U7 264 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 CLPTM1LQ96KA5 538 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 KLHL32Q96NJ5 620 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 P2RY13Q9BPV8 354 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 DESI2Q9BSY9 194 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 NUSAP1Q9BXS6 441 aaKnown RBP3.75□□□□□ -1.81
SCFD1-204ENST00000463622 PACSIN1Q9BY11 444 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 IMPG2Q9BZV3 1241 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 KLK15Q9H2R5 256 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 FAM49BQ9NUQ9 324 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 SLC38A7Q9NVC3 462 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 ASB6Q9NWX5 421 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 GDAP2Q9NXN4 497 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 CHORDC1Q9UHD1 332 aaPredicted RBP3.75□□□□□ -1.81
SCFD1-204ENST00000463622 PILRBQ9UKJ0 227 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 CNTN6Q9UQ52 1028 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 YIPF1Q9Y548 306 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.75□□□□□ -1.81
SCFD1-204ENST00000463622 ACACAQ13085 2346 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 GREB1Q4ZG55 1949 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 ASCC3Q8N3C0 2202 aaKnown RBP3.75□□□□□ -1.81
SCFD1-204ENST00000463622 COL4A2P08572 1712 aa3.75□□□□□ -1.81
SCFD1-204ENST00000463622 SPTA1P02549 2419 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 A0A087X0T9 212 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 AKR1B15C9JRZ8 316 aaPredicted RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 M0QZQ0 153 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 GABRDO14764 452 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 STX10O60499 249 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CBFA2T3O75081 653 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PRB1P04280 392 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CD1AP06126 327 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 SERPINF2P08697 491 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 FAM228BP0C875 321 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 KRT5P13647 590 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 WARSP23381 471 aaKnown RBP3.74□□□□□ -1.81
SCFD1-204ENST00000463622 CD38P28907 300 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 USP8P40818 1118 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 WASP42768 502 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PTGER3P43115 390 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PGFP49763 221 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 DGKEP52429 567 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 AP3M2P53677 418 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ZBED6P86452 979 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 MC2RQ01718 297 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 GCNT1Q02742 428 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 INCA1Q0VD86 236 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 ODF1Q14990 250 aa3.74□□□□□ -1.81
SCFD1-204ENST00000463622 PDGFRLQ15198 375 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms