RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 SDR16C5Q8N3Y7 309 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 GDAP1Q8TB36 358 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 SAP25Q8TEE9 199 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 SETD7Q8WTS6 366 aaKnown RBP19.65■□□□□ 0.74
COL9A3-204ENST00000463487 PTCD2Q8WV60 388 aaKnown RBP19.65■□□□□ 0.74
COL9A3-204ENST00000463487 COX14Q96I36 57 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 TTC25Q96NG3 672 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 FRMD8Q9BZ67 464 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-204ENST00000463487 RMI1Q9H9A7 625 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 NLE1Q9NVX2 485 aaPredicted RBP19.65■□□□□ 0.74
COL9A3-204ENST00000463487 RIMKLBQ9ULI2 386 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 SLC17A4Q9Y2C5 497 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 KNL1Q8NG31 2342 aa19.65■□□□□ 0.74
COL9A3-204ENST00000463487 SCN8AQ9UQD0 1980 aa19.64■□□□□ 0.74
COL9A3-204ENST00000463487 DNALI1O14645 258 aaPredicted RBP19.64■□□□□ 0.73
COL9A3-204ENST00000463487 TTI1O43156 1089 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 SDC3O75056 442 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 IVLP07476 585 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 DGKAP23743 735 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 C2orf54Q08AI8 447 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 PEX6Q13608 980 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 ELOCQ15369 112 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 LDLRAP1Q5SW96 308 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 DOK6Q6PKX4 331 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 BBOF1Q8ND07 529 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 OR13C4Q8NGS5 318 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 SCG3Q8WXD2 468 aaKnown RBP19.64■□□□□ 0.73
COL9A3-204ENST00000463487 TSACCQ96A04 125 aaPredicted RBP19.64■□□□□ 0.73
COL9A3-204ENST00000463487 ULK4Q96C45 1275 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 PDXPQ96GD0 296 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 DNAJC1Q96KC8 554 aaKnown RBP19.64■□□□□ 0.73
COL9A3-204ENST00000463487 CYP4F12Q9HCS2 524 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 FGF22Q9HCT0 170 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 SMOXQ9NWM0 555 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 SAMD15Q9P1V8 674 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 FKBPLQ9UIM3 349 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 DOLKQ9UPQ8 538 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 TCAF1Q9Y4C2 921 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 CSNK1G3Q9Y6M4 447 aa19.64■□□□□ 0.73
COL9A3-204ENST00000463487 MROH6A6NGR9 719 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 H7C0S8 307 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 AQP9O43315 295 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 VEGFDO43915 354 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 SRP72O76094 671 aaKnown RBP19.63■□□□□ 0.73
COL9A3-204ENST00000463487 CD59P13987 128 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 TMPRSS15P98073 1019 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 GTF2H3Q13889 308 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 PUM1Q14671 1186 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL9A3-204ENST00000463487 MORF4L2Q15014 288 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 SHBQ15464 509 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 CHRNA6Q15825 494 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 ATP13A5Q4VNC0 1218 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 CCDC38Q502W7 563 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 PRRT3Q5FWE3 981 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 RNASEH2BQ5TBB1 312 aaKnown RBP19.63■□□□□ 0.73
COL9A3-204ENST00000463487 IZUMO3Q5VZ72 239 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 ZNF548Q8NEK5 533 aaPredicted RBP19.63■□□□□ 0.73
COL9A3-204ENST00000463487 ZNF398Q8TD17 642 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 LMX1AQ8TE12 382 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 OR1E3Q8WZA6 343 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.63■□□□□ 0.73
COL9A3-204ENST00000463487 SNF8Q96H20 258 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 TTC1Q99614 292 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 DUSP23Q9BVJ7 150 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 RAB17Q9H0T7 212 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 ASB8Q9H765 288 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 CARS2Q9HA77 564 aaKnown RBP19.63■□□□□ 0.73
COL9A3-204ENST00000463487 TRIM39Q9HCM9 518 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 EVA1BQ9NVM1 165 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 CRLS1Q9UJA2 301 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 UTP11Q9Y3A2 253 aaKnown RBP19.63■□□□□ 0.73
COL9A3-204ENST00000463487 KCTD3Q9Y597 815 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 MRFAP1Q9Y605 127 aa19.63■□□□□ 0.73
COL9A3-204ENST00000463487 ZNF292O60281 2723 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 TCRBV7S3A2A0A539 114 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 EFCAB8A8MWE9 144 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 CEACAM5P06731 702 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 RALBP11234 206 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 CSRP1P21291 193 aaKnown RBP19.62■□□□□ 0.73
COL9A3-204ENST00000463487 PRAMEP78395 509 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 BNIP3Q12983 259 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 NFATC2Q13469 925 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 PTPRCAPQ14761 206 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 GPR33Q49SQ1 333 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 TSTD2Q5T7W7 516 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 CASC4Q6P4E1 433 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 DBX2Q6ZNG2 339 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 SNX20Q7Z614 316 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 TRIM74Q86UV6 250 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 GKN2Q86XP6 184 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 GATAD2AQ86YP4 633 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 GALNT13Q8IUC8 556 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 NAT8LQ8N9F0 302 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 RHBDD1Q8TEB9 315 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 HEXDCQ8WVB3 486 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 CDC6Q99741 560 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 LRRC61Q9BV99 259 aa19.62■□□□□ 0.73
COL9A3-204ENST00000463487 MRM3Q9HC36 420 aaKnown RBP19.62■□□□□ 0.73
COL9A3-204ENST00000463487 CNOT6Q9ULM6 557 aaKnown RBP19.62■□□□□ 0.73
COL9A3-204ENST00000463487 MAGEB16A2A368 324 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms