RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 MC1RQ01726 317 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 NCAPHQ15003 741 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 BOLA3Q53S33 107 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 IYDQ6PHW0 289 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 KDELC2Q7Z4H8 507 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 TEX26Q8N6G2 289 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 HSPH1Q92598 858 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 SH3KBP1Q96B97 665 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 ZNF653Q96CK0 615 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 HSD3B7Q9H2F3 369 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 STN1Q9H668 368 aaKnown RBP20.56■□□□□ 0.88
CPSF7-209ENST00000463244 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.56■□□□□ 0.88
CPSF7-209ENST00000463244 PRKAB1Q9Y478 270 aa20.56■□□□□ 0.88
CPSF7-209ENST00000463244 ICE1Q9Y2F5 2266 aa20.55■□□□□ 0.88
CPSF7-209ENST00000463244 A6NCN8 305 aa20.55■□□□□ 0.88
CPSF7-209ENST00000463244 POLR1CO15160 346 aaPredicted RBP20.55■□□□□ 0.88
CPSF7-209ENST00000463244 ASMTLO95671 621 aa20.55■□□□□ 0.88
CPSF7-209ENST00000463244 ATP1A1P05023 1023 aaKnown RBP20.55■□□□□ 0.88
CPSF7-209ENST00000463244 TCN2P20062 427 aa20.55■□□□□ 0.88
CPSF7-209ENST00000463244 STAT5AP42229 794 aa20.55■□□□□ 0.88
CPSF7-209ENST00000463244 LACTB2Q53H82 288 aaPredicted RBP20.55■□□□□ 0.88
CPSF7-209ENST00000463244 CHST15Q7LFX5 561 aaPredicted RBP20.55■□□□□ 0.88
CPSF7-209ENST00000463244 LURAP1LQ8IV03 231 aa20.55■□□□□ 0.88
CPSF7-209ENST00000463244 RAVER1Q8IY67 606 aaKnown RBP20.55■□□□□ 0.88
CPSF7-209ENST00000463244 HERPUD2Q9BSE4 406 aa20.55■□□□□ 0.88
CPSF7-209ENST00000463244 HAUS4Q9H6D7 363 aa20.55■□□□□ 0.88
CPSF7-209ENST00000463244 CNOT6Q9ULM6 557 aaKnown RBP20.55■□□□□ 0.88
CPSF7-209ENST00000463244 MAN2B2Q9Y2E5 1009 aa20.55■□□□□ 0.88
CPSF7-209ENST00000463244 OAS3Q9Y6K5 1087 aaKnown RBP20.55■□□□□ 0.88
CPSF7-209ENST00000463244 LRRC53A6NM62 1247 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 RARAP10276 462 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 SEPT6Q14141 434 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 MAP7Q14244 749 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 IHHQ14623 411 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 ATP1A1-AS1Q5TC04 95 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 ALG1LQ6GMV1 187 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 ZNF571Q7Z3V5 609 aaPredicted RBP20.54■□□□□ 0.88
CPSF7-209ENST00000463244 SLC9B2Q86UD5 537 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 FAM26EQ8N5C1 309 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 POLR1EQ9GZS1 481 aaKnown RBP20.54■□□□□ 0.88
CPSF7-209ENST00000463244 EPB41L1Q9H4G0 881 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 MRPL47Q9HD33 250 aaKnown RBP20.54■□□□□ 0.88
CPSF7-209ENST00000463244 SIDT1Q9NXL6 827 aaKnown RBP20.54■□□□□ 0.88
CPSF7-209ENST00000463244 KLHL3Q9UH77 587 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 DNPEPQ9ULA0 475 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 PLAAQ9Y263 795 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 GTF3C3Q9Y5Q9 886 aa20.54■□□□□ 0.88
CPSF7-209ENST00000463244 ZNF106Q9H2Y7 1883 aaKnown RBP20.54■□□□□ 0.88
CPSF7-209ENST00000463244 MN1Q10571 1320 aaPredicted RBP20.53■□□□□ 0.88
CPSF7-209ENST00000463244 PRR19A6NJB7 356 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 F3P13726 295 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 MAPK9P45984 424 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 EPHB1P54762 984 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 ITKQ08881 620 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 TXNRD3NBQ6F5E7 133 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 C16orf46Q6P387 395 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 LYSMD3Q7Z3D4 306 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 LRRC49Q8IUZ0 686 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 ESX1Q8N693 406 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 TBC1D10AQ9BXI6 508 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.53■□□□□ 0.88
CPSF7-209ENST00000463244 PCDH18Q9HCL0 1135 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 ANO10Q9NW15 660 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 KCNK6Q9Y257 313 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 KCTD3Q9Y597 815 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 MRPS18BQ9Y676 258 aaKnown RBP20.53■□□□□ 0.88
CPSF7-209ENST00000463244 RPS6KL1Q9Y6S9 549 aa20.53■□□□□ 0.88
CPSF7-209ENST00000463244 MYO9AB2RTY4 2548 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 KIR2DS5A0A0G2JLQ3 304 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 A0A0G2JNG1 304 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 KIR2DS3K7RE56 304 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 DDX3XO00571 662 aaKnown RBP eCLIP20.52■□□□□ 0.881e-6■■■■□ 20.9
CPSF7-209ENST00000463244 CLDN7O95471 211 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 ANKRD34CP0C6C1 535 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 MYBL1P10243 752 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 ACP5P13686 325 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 SLC2A4P14672 509 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 F8A1P23610 371 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 KLRB1Q12918 225 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 KIR2DS5Q14953 304 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 ASIC2Q16515 512 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 TEKT4Q8WW24 435 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 MIB2Q96AX9 1013 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 TRIM11Q96F44 468 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 WDR24Q96S15 920 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 LYSMD1Q96S90 227 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 TDRD1Q9BXT4 1180 aaKnown RBP20.52■□□□□ 0.88
CPSF7-209ENST00000463244 RMI1Q9H9A7 625 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 LMBRD1Q9NUN5 540 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 MYO1AQ9UBC5 1043 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 CPNE7Q9UBL6 633 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 CHKBQ9Y259 395 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 KCNMB2Q9Y691 235 aa20.52■□□□□ 0.88
CPSF7-209ENST00000463244 LILRA5A6NI73 299 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 FADS2P1A8MWK0 482 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 SNX2O60749 519 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 PRLP01236 227 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 CES1P23141 567 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 PRKCIP41743 596 aa20.51■□□□□ 0.87
CPSF7-209ENST00000463244 NOP2P46087 812 aaKnown RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms