RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 SLC35F3Q8IY50 421 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 PDCD7Q8N8D1 485 aaKnown RBP15.72■□□□□ 0.11
ERCC3-206ENST00000462306 DTX3LQ8TDB6 740 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 BRSK1Q8TDC3 778 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 COG1Q8WTW3 980 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 SCG3Q8WXD2 468 aaKnown RBP15.72■□□□□ 0.11
ERCC3-206ENST00000462306 GLYATL1Q969I3 302 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 MS4A14Q96JA4 679 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 SUDS3Q9H7L9 328 aaPredicted RBP15.72■□□□□ 0.11
ERCC3-206ENST00000462306 ETNK1Q9HBU6 452 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 NCKIPSDQ9NZQ3 722 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 FEZ2Q9UHY8 353 aaPredicted RBP15.72■□□□□ 0.11
ERCC3-206ENST00000462306 KLK13Q9UKR3 277 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 TMPRSS11EQ9UL52 423 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 DOLKQ9UPQ8 538 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 KCTD3Q9Y597 815 aa15.72■□□□□ 0.11
ERCC3-206ENST00000462306 PCYT1BQ9Y5K3 369 aaPredicted RBP15.72■□□□□ 0.11
ERCC3-206ENST00000462306 GOLGA4Q13439 2230 aaKnown RBP15.72■□□□□ 0.11
ERCC3-206ENST00000462306 PPFIA2O75334 1257 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 ASMTLO95671 621 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 ZSCAN5DPP0CG00 497 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 CDK4P11802 303 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 LPOP22079 712 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-206ENST00000462306 MSNP26038 577 aaKnown RBP15.71■□□□□ 0.11
ERCC3-206ENST00000462306 RPL22P35268 128 aaKnown RBP15.71■□□□□ 0.11
ERCC3-206ENST00000462306 FDFT1P37268 417 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 SPAM1P38567 509 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 ADCY8P40145 1251 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 KCNJ1P48048 391 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 DUSP3P51452 185 aaPredicted RBP15.71■□□□□ 0.11
ERCC3-206ENST00000462306 SMAD1Q15797 465 aaKnown RBP15.71■□□□□ 0.11
ERCC3-206ENST00000462306 ATP13A5Q4VNC0 1218 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 ZDHHC20Q5W0Z9 365 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 OGFOD3Q6PK18 319 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 MARK2Q7KZI7 788 aaKnown RBP15.71■□□□□ 0.11
ERCC3-206ENST00000462306 TMPRSS7Q7RTY8 843 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 CCDC89Q8N998 374 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 OSBPL9Q96SU4 736 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 ARFGAP3Q9NP61 516 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 HOMER3Q9NSC5 361 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 GPR34Q9UPC5 381 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 PKP3Q9Y446 797 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 PLEKHM1Q9Y4G2 1056 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 NEUROG3Q9Y4Z2 214 aa15.71■□□□□ 0.11
ERCC3-206ENST00000462306 CEP295Q9C0D2 2601 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 EME2A4GXA9 379 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-206ENST00000462306 C2orf81A6NN90 581 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 ERI2A8K979 691 aaKnown RBP15.7■□□□□ 0.1
ERCC3-206ENST00000462306 STX7O15400 261 aaKnown RBP15.7■□□□□ 0.1
ERCC3-206ENST00000462306 SUN1O94901 812 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 SLC25A14O95258 325 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-206ENST00000462306 AK4P27144 223 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-206ENST00000462306 ACTN2P35609 894 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 CTBSQ01459 385 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 ILF3Q12906 894 aaKnown RBP eCLIP15.7■□□□□ 0.1
ERCC3-206ENST00000462306 SEMA5AQ13591 1074 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 NR0B2Q15466 257 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 CHRNA6Q15825 494 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 ZNF648Q5T619 568 aaPredicted RBP15.7■□□□□ 0.1
ERCC3-206ENST00000462306 GUSBP11Q6P575 273 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 ADGRG6Q86SQ4 1221 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 SFTPA2Q8IWL1 248 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 ARL10Q8N8L6 244 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 KYQ8NBH2 561 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 FAM46DQ8NEK8 389 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 GPR156Q8NFN8 814 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 OR4K2Q8NGD2 314 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 GLMNQ92990 594 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 LRRC45Q96CN5 670 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 VPS35Q96QK1 796 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 OR2M4Q96R27 311 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 GSDMCQ9BYG8 508 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 TRIM39Q9HCM9 518 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 RAB6BQ9NRW1 208 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 SPATS2LQ9NUQ6 558 aaKnown RBP15.7■□□□□ 0.1
ERCC3-206ENST00000462306 EVA1BQ9NVM1 165 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 SMARCAL1Q9NZC9 954 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.7■□□□□ 0.1
ERCC3-206ENST00000462306 SIRPGQ9P1W8 387 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 PAK5Q9P286 719 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 ATXN10Q9UBB4 475 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 GULP1Q9UBP9 304 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 PADI4Q9UM07 663 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 SNX12Q9UMY4 172 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 GPSM3Q9Y4H4 160 aa15.7■□□□□ 0.1
ERCC3-206ENST00000462306 PTPRBP23467 1997 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 GLYATL1P3A0A0U1RQE8 302 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 LDB2O43679 373 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 NUAK1O60285 661 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 NOBOXO60393 691 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 UGT1A9O60656 530 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 CRTAMO95727 393 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 GP1BAP07359 652 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 ZNF8P17098 575 aaPredicted RBP15.69■□□□□ 0.1
ERCC3-206ENST00000462306 TPH1P17752 444 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 UGT1A6P19224 532 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 UGT1A1P22309 533 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 UGT1A4P22310 534 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 CA5AP35218 305 aa15.69■□□□□ 0.1
ERCC3-206ENST00000462306 UGT1A3P35503 534 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms