RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 FANCEQ9HB96 536 aa10.36□□□□□ -0.75
HERC4-207ENST00000460168 FCF1Q9Y324 198 aaKnown RBP10.36□□□□□ -0.75
HERC4-207ENST00000460168 C2orf16Q68DN1 1984 aa10.36□□□□□ -0.75
HERC4-207ENST00000460168 MYLKQ15746 1914 aa10.36□□□□□ -0.75
HERC4-207ENST00000460168 SLC9A3R1O14745 358 aaPredicted RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 EPOP01588 193 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 FGF1P05230 155 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 ATXN1LP0C7T5 689 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 TYRP14679 529 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 GNAZP19086 355 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 CR2P20023 1033 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 CA4P22748 312 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 POLR2GP62487 172 aaKnown RBP eCLIP10.35□□□□□ -0.75
HERC4-207ENST00000460168 SLC12A1Q13621 1099 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 BMPR2Q13873 1038 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 LY6G5CQ5SRR4 150 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 PDPK2PQ6A1A2 396 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 MILR1Q7Z6M3 343 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 ALDH16A1Q8IZ83 802 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 ADGRG2Q8IZP9 1017 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 PDCD6IPQ8WUM4 868 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 RMDN1Q96DB5 314 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 MTBPQ96DY7 904 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 NUDCD1Q96RS6 583 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 KLF6Q99612 283 aaPredicted RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 TM6SF2Q9BZW4 377 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 MLXIPLQ9NP71 852 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 SNX5Q9Y5X3 404 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 K7ERQ8 282 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 ADAM23O75077 832 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 VAPBO95292 243 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 FSHRP23945 695 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 PSMA4P25789 261 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 CNTFP26441 200 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 ARFIP2P53365 341 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 FRG1Q14331 258 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 LRRC14Q15048 493 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 SLC14A2Q15849 920 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 PITRM1Q5JRX3 1037 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 RNF43Q68DV7 783 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 ESRP1Q6NXG1 681 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 NPAS3Q8IXF0 933 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 ZNF557Q8N988 423 aaPredicted RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 BLOC1S5Q8TDH9 187 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 ALKBH8Q96BT7 664 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 RBM18Q96H35 190 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 RPL10LQ96L21 214 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 AGAP2Q99490 1192 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 CPNE1Q99829 537 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 DHRS9Q9BPW9 319 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 TRIM8Q9BZR9 551 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 MRM3Q9HC36 420 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 TIMMDC1Q9NPL8 285 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 CDH22Q9UJ99 828 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 SLC12A4Q9UP95 1085 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 SMG5Q9UPR3 1016 aaKnown RBP10.35□□□□□ -0.75
HERC4-207ENST00000460168 CHKBQ9Y259 395 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 PCDHGC4Q9Y5F7 938 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 PSAT1Q9Y617 370 aa10.35□□□□□ -0.75
HERC4-207ENST00000460168 PRRC2BQ5JSZ5 2229 aaKnown RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 MAGEA13PA6NCF6 341 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 PRPF4O43172 522 aaKnown RBP eCLIP10.34□□□□□ -0.75
HERC4-207ENST00000460168 NDST3O95803 873 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 GLP2RO95838 553 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 PDHA1P08559 390 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 ALAS2P22557 587 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 GP5P40197 560 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 DCTN2Q13561 401 aaKnown RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 MPP2Q14168 576 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 FBXO43Q4G163 708 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 ATXN7L2Q5T6C5 722 aaPredicted RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 STRA8Q7Z7C7 330 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 FGF13Q92913 245 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 SERAC1Q96JX3 654 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 TDRD1Q9BXT4 1180 aaKnown RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 NSUN3Q9H649 340 aaKnown RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 NEK6Q9HC98 313 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 IARS2Q9NSE4 1012 aaKnown RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 DUS2Q9NX74 493 aaKnown RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 LHX3Q9UBR4 397 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 PRKAG3Q9UGI9 489 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 SLC2A6Q9UGQ3 507 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 INTS6Q9UL03 887 aaKnown RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 RAI2Q9Y5P3 530 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 NUP210Q8TEM1 1887 aaPredicted RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 LINC01565O15544 149 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 SMAD6O43541 496 aaKnown RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 PRKCGP05129 697 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 ENO2P09104 434 aaPredicted RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 PIRTP0C851 137 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 IFNA8P32881 189 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 RPA3P35244 121 aaPredicted RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 VIPR2P41587 438 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 HYAL1Q12794 435 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 TCEAL5Q5H9L2 206 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 ZC3H12BQ5HYM0 836 aaKnown RBP10.34□□□□□ -0.75
HERC4-207ENST00000460168 FAM78AQ5JUQ0 283 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 TEDDM1Q5T9Z0 273 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 GPR149Q86SP6 731 aa10.34□□□□□ -0.75
HERC4-207ENST00000460168 NAT16Q8N8M0 369 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms