RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 LACTBL1A8MY62 500 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 TBL1XO60907 577 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 NPR2P20594 1047 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 GRHL2Q6ISB3 625 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 ZNF548Q8NEK5 533 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 TCF12Q99081 682 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 GPRC5CQ9NQ84 441 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SMPD4Q9NXE4 827 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 STOX2Q9P2F5 926 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 COL1A2P08123 1366 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 IQCMA0A1B0GVH7 501 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 PIGNO95427 931 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 GRIA3P42263 894 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 PRR5P85299 388 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 ZNF155Q12901 538 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SLC25A25Q6KCM7 469 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 PGBD2Q6P3X8 592 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 GAL3ST3Q96A11 431 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 LRRC46Q96FV0 321 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 BRINP2Q9C0B6 783 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 UBR1Q8IWV7 1749 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 ZNF432O94892 652 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 RB1P06400 928 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 VEGFAP15692 232 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 ITIH1P19827 911 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 PTPN9P43378 593 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 ALDH5A1P51649 535 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 RPL38P63173 70 aaKnown RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 DEFB106AQ8N104 65 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 RAB11FIP5Q9BXF6 653 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 USP20Q9Y2K6 914 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 AKAP8O43823 692 aaKnown RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SAGP10523 405 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 IST1P53990 364 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 USP50Q70EL3 339 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 UNC5BQ8IZJ1 945 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 PTGR2Q8N8N7 351 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 CERS2Q96G23 380 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SEMA6AQ9H2E6 1030 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 MEGF6O75095 1541 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 OR6C75A6NL08 312 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 ISM1B1AKI9 464 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 RFXANKO14593 260 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 PDHA2P29803 388 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 MECP2P51608 486 aaKnown RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 NUP54Q7Z3B4 507 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SUN3Q8TAQ9 357 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SLC22A17Q8WUG5 538 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 MYO19Q96H55 970 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 FCRL4Q96PJ5 515 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 TRNT1Q96Q11 434 aaKnown RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 THUMPD1Q9NXG2 353 aaKnown RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 MRPS7Q9Y2R9 242 aaKnown RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 RAP2CQ9Y3L5 183 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 ADGRB1O14514 1584 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 LRRC72A6NJI9 287 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 PITPNM1O00562 1244 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 CASKO14936 926 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 TRIM3O75382 744 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SLC22A3O75751 556 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 ADRA1DP25100 572 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 ABCA11PQ4W5N1 156 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 BRMS1LQ5PSV4 323 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SV2AQ7L0J3 742 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 DET1Q7L5Y6 550 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 SCUBE3Q8IX30 993 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 PIGXQ8TBF5 258 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 OR52E6Q96RD3 313 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 NXF3Q9H4D5 531 aaKnown RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 B3GAT2Q9NPZ5 323 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 TRNAU1APQ9NX07 287 aaKnown RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 PTTG2Q9NZH5 202 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 GLS2Q9UI32 602 aa8.86□□□□□ -0.99
SHROOM4-203ENST00000460112 COX4I1P13073 169 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 TPH1P17752 444 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 ERVK-24P63145 666 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 GPC2Q8N158 579 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 NDNQ99608 321 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 YTHDF1Q9BYJ9 559 aaKnown RBP8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 CPA4Q9UI42 421 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 PCDHGB7Q9Y5F8 929 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 MAP3K6O95382 1288 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 TRBC1P01850 177 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 IGFBP4P22692 258 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 IL18Q14116 193 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 ZNF571Q7Z3V5 609 aaPredicted RBP8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 RIOX2Q8IUF8 465 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 PNLDC1Q8NA58 520 aaKnown RBP8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 RIOX1Q9H6W3 641 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 PCDH12Q9NPG4 1184 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 PCDH10Q9P2E7 1040 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 CAPN6Q9Y6Q1 641 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 GRIN2DO15399 1336 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 UBE2Q2LH0YL09 131 aa8.85□□□□□ -0.99
SHROOM4-203ENST00000460112 DDX3XO00571 662 aaKnown RBP eCLIP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms