RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 MMP12P39900 470 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 KRT81Q14533 505 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 GRM3Q14832 879 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 CA9Q16790 459 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 ODF2Q5BJF6 829 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 PPP6R3Q5H9R7 873 aaPredicted RBP16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 ATP1A1-AS1Q5TC04 95 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 ZNF787Q6DD87 383 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 TXNRD3NBQ6F5E7 133 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 BRAT1Q6PJG6 821 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 CEACAM20Q6UY09 585 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 ZNF662Q6ZS27 426 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 CYP4V2Q6ZWL3 525 aaPredicted RBP16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 TIPARPQ7Z3E1 657 aaKnown RBP16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 NRROSQ86YC3 692 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 PSTKQ8IV42 348 aaKnown RBP16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 SYCE1Q8N0S2 351 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 TEKT4Q8WW24 435 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 TRIM44Q96DX7 344 aaPredicted RBP16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 LGR4Q9BXB1 951 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 WDR26Q9H7D7 661 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 CARS2Q9HA77 564 aaKnown RBP16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 TMEM9Q9P0T7 183 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 TAAR2Q9P1P5 351 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 PDP2Q9P2J9 529 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 SRPK3Q9UPE1 567 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 ATP8A1Q9Y2Q0 1164 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 TMEM184BQ9Y519 407 aaPredicted RBP16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 CAPN6Q9Y6Q1 641 aa16.56■□□□□ 0.24
TMEM50B-205ENST00000459909 FAM72CH0Y354 149 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 LRIG2O94898 1065 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 RNF224P0DH78 156 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 TPI1P60174 286 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 GPLD1P80108 840 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 MC2RQ01718 297 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 PEX6Q13608 980 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 CFAP58Q5T655 872 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 FAM72AQ5TYM5 149 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 FAM72DQ6L9T8 149 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 FAM72BQ86X60 149 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 ZNF354CQ86Y25 554 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 TICAM1Q8IUC6 712 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 RHOT1Q8IXI2 618 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 NETO2Q8NC67 525 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 CPT1CQ8TCG5 803 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 TBC1D31Q96DN5 1066 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 ZNF641Q96N77 438 aaPredicted RBP16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 TRNAU1APQ9NX07 287 aaKnown RBP16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 PCDHB3Q9Y5E6 796 aa16.55■□□□□ 0.24
TMEM50B-205ENST00000459909 EEF2KO00418 725 aaKnown RBP16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 PPM1DO15297 605 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 STK17BO94768 372 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 CDH6P55285 790 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 RIPPLY3P57055 190 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 ATP13A4Q4VNC1 1196 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 PEX26Q7Z412 305 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 POLNQ7Z5Q5 900 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 NAGSQ8N159 534 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 LRRC57Q8N9N7 239 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 KCTD6Q8NC69 237 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 ALS2CR12Q96Q35 445 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 KCTD15Q96SI1 283 aaPredicted RBP16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 CTRCQ99895 268 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 ZMYND15Q9H091 742 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 FBXO8Q9NRD0 319 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 AMFRQ9UKV5 643 aa16.54■□□□□ 0.24
TMEM50B-205ENST00000459909 H3BRJ5 948 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 DAPK3O43293 454 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 RFPL1O75677 317 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 FTCDO95954 541 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 KRT1P04264 644 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 MYCLP1P12525 358 aaPredicted RBP16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 AK4P27144 223 aaPredicted RBP16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 EPHB2P29323 1055 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 DCTP40126 519 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 ARL4AP40617 200 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 STAT5AP42229 794 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 MAP7Q14244 749 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 DPYSL2Q16555 572 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 LRRC38Q5VT99 294 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 PNCKQ6P2M8 343 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 MAMDC2Q7Z304 686 aaPredicted RBP16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 REXO1L1PQ8IX06 675 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 ESX1Q8N693 406 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 PATE1Q8WXA2 126 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 EXOC2Q96KP1 924 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 DDX56Q9NY93 547 aaKnown RBP16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 LHX3Q9UBR4 397 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 NEU3Q9UQ49 428 aa16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.53■□□□□ 0.24
TMEM50B-205ENST00000459909 LRRD1A4D1F6 860 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 PSTPIP1O43586 416 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 DLGAP3O95886 979 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 ELFN1P0C7U0 828 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 RALGDSQ12967 914 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 SLC30A9Q6PML9 568 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 LIPIQ6XZB0 460 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 ARHGAP22Q7Z5H3 698 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 NT5DC3Q86UY8 548 aa16.52■□□□□ 0.24
TMEM50B-205ENST00000459909 ZSWIM9Q86XI8 627 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms