RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 IL23RQ5VWK5 629 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 IL31Q6EBC2 164 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 BLOC1S3Q6QNY0 202 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 ZBTB49Q6ZSB9 765 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 ADAMTSL2Q86TH1 951 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 PTRH1Q86Y79 214 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 MIB1Q86YT6 1006 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 FAM9CQ8IZT9 166 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 LGI2Q8N0V4 545 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 PGBD5Q8N414 524 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 EFCAB3Q8N7B9 438 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 PHC3Q8NDX5 983 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 TSPAN14Q8NG11 270 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 OR52K2Q8NGK3 314 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 DNAJB8Q8NHS0 232 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 IGSF8Q969P0 613 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 PTERQ96BW5 349 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 RMND5BQ96G75 393 aaPredicted RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 CENPNQ96H22 339 aaPredicted RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 PDLIM5Q96HC4 596 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 CLK4Q9HAZ1 481 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 NMRK2Q9NPI5 230 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 AIG1Q9NVV5 245 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 POLR3BQ9NW08 1133 aaPredicted RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 MARCH4Q9P2E8 410 aaPredicted RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 POLG2Q9UHN1 485 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 MAGEL2Q9UJ55 1249 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 CRYL1Q9Y2S2 319 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 ZNF711Q9Y462 761 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 PCDHB7Q9Y5E2 793 aa8.8□□□□□ -1
HDAC3-202ENST00000459727 NYNRINQ9P2P1 1898 aaKnown RBP8.8□□□□□ -1
HDAC3-202ENST00000459727 SHROOM3Q8TF72 1996 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 CASP8AP2Q9UKL3 1982 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 A0A087WXM4 84 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 CXorf51AA0A1B0GTR3 108 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 UBA6A0AVT1 1052 aaPredicted RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 E5RI56 91 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 H3BNH8 94 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 UBXN8O00124 270 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 AKAP10O43572 662 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 BMP10O95393 424 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 MYCNP04198 464 aaPredicted RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 ALDH2P05091 517 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 TFAP2AP05549 437 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 RHOCP08134 193 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 F7P08709 466 aaPredicted RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 OR4Q2P0C623 313 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 MTHFD2P13995 350 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 HGFP14210 728 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 HOXD9P28356 352 aaPredicted RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 HOXD10P28358 340 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 TM4SF4P48230 202 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 FLT3LGP49771 235 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 RGS4P49798 205 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 ACLYP53396 1101 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 SH3BP2P78314 561 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 EPS8Q12929 822 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 BFSP2Q13515 415 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 NFYCQ13952 458 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 PPP1R3AQ16821 1122 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.79□□□□□ -1
HDAC3-202ENST00000459727 ATP6AP1LQ52LC2 224 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 XKR7Q5GH72 579 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 CLLU1OSQ5K130 101 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 TBCELQ5QJ74 424 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 CST9Q5W186 159 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 CLEC6AQ6EIG7 209 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 ZNF549Q6P9A3 640 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 PAOXQ6QHF9 649 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 TMEM207Q6UWW9 146 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 GPRIN3Q6ZVF9 776 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 PIM3Q86V86 326 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 SATL1Q86VE3 508 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 GPSM1Q86YR5 675 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 PHYKPLQ8IUZ5 450 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 REM2Q8IYK8 340 aaPredicted RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 LILRA2Q8N149 483 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 RYBPQ8N488 228 aaPredicted RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 TRIML2Q8N7C3 387 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 RNF148Q8N7C7 305 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 PAPD5Q8NDF8 572 aaKnown RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 HMGCLL1Q8TB92 370 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 SHKBP1Q8TBC3 707 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 PNPT1Q8TCS8 783 aaKnown RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 SEPT8Q92599 483 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 LRRC58Q96CX6 371 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 RMDN1Q96DB5 314 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 HIC2Q96JB3 615 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 MYRFLQ96LU7 910 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 PRPF18Q99633 342 aaKnown RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 SEPT5Q99719 369 aaPredicted RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 SH3GL1Q99961 368 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 TMEM79Q9BSE2 394 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 TDRD1Q9BXT4 1180 aaKnown RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 CIDEBQ9UHD4 219 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 NUDT5Q9UKK9 219 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 AGO1Q9UL18 857 aaKnown RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 PRG3Q9Y2Y8 225 aaPredicted RBP8.79□□□□□ -1
HDAC3-202ENST00000459727 PKP3Q9Y446 797 aa8.79□□□□□ -1
HDAC3-202ENST00000459727 ARL5AQ9Y689 179 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms