RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 NIPA2Q8N8Q9 360 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 AVL9Q8NBF6 648 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 FATE1Q969F0 183 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 ZNF653Q96CK0 615 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 AGAP2Q99490 1192 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-227ENST00000458564 POLR1EQ9GZS1 481 aaKnown RBP10.34□□□□□ -0.75
HDLBP-227ENST00000458564 RMI1Q9H9A7 625 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 MRPL47Q9HD33 250 aaKnown RBP10.34□□□□□ -0.75
HDLBP-227ENST00000458564 ANO10Q9NW15 660 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 SIDT1Q9NXL6 827 aaKnown RBP10.34□□□□□ -0.75
HDLBP-227ENST00000458564 AIPL1Q9NZN9 384 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 RCOR3Q9P2K3 495 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-227ENST00000458564 TBC1D29Q9UFV1 150 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 AMACRQ9UHK6 382 aa10.34□□□□□ -0.75
HDLBP-227ENST00000458564 PCYT1BQ9Y5K3 369 aaPredicted RBP10.34□□□□□ -0.75
HDLBP-227ENST00000458564 SPTBN1Q01082 2364 aaKnown RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 KIR2DS5A0A0G2JLQ3 304 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 A0A0G2JNG1 304 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 A0A0U1RQS6 177 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 LRRC53A6NM62 1247 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 OR5K4A6NMS3 321 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 KIR2DS3K7RE56 304 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 DDX3XO00571 662 aaKnown RBP eCLIP10.33□□□□□ -0.762e-19■■□□□ 12.7
HDLBP-227ENST00000458564 POLR1CO15160 346 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 RARAP10276 462 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 PRKAR1AP10644 381 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 F3P13726 295 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 CES1P23141 567 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 RPL26P61254 145 aaKnown RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 SLC25A11Q02978 314 aaKnown RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 IHHQ14623 411 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 KIR2DS5Q14953 304 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 IGFBP7Q16270 282 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 STX1AQ16623 288 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 LACTB2Q53H82 288 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 SNAP47Q5SQN1 464 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 E4F1Q66K89 784 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 LYSMD3Q7Z3D4 306 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 ZNF571Q7Z3V5 609 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 SLC9B2Q86UD5 537 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 UNC5BQ8IZJ1 945 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 FAM71BQ8TC56 605 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 NCSTNQ92542 709 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 MAML1Q92585 1016 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 HSPH1Q92598 858 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 ABHD17AQ96GS6 310 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 WDR24Q96S15 920 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 CTRCQ99895 268 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 RIOK2Q9BVS4 552 aaKnown RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 TDRD1Q9BXT4 1180 aaKnown RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 ISCUQ9H1K1 167 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 HAUS4Q9H6D7 363 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 UCK1Q9HA47 277 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 PCDH18Q9HCL0 1135 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 APMAPQ9HDC9 416 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 NT5MQ9NPB1 228 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 ZNF71Q9NQZ8 489 aaPredicted RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 LMBRD1Q9NUN5 540 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 CNOT6Q9ULM6 557 aaKnown RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 RPL26L1Q9UNX3 145 aaKnown RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 KCTD3Q9Y597 815 aa10.33□□□□□ -0.76
HDLBP-227ENST00000458564 OAS3Q9Y6K5 1087 aaKnown RBP10.33□□□□□ -0.76
HDLBP-227ENST00000458564 NOTCH2Q04721 2471 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 TRBV23OR9-2A0A075B6M9 112 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 A8MU76 341 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 GPR89AB7ZAQ6 455 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 INPP4BO15327 924 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 TOX3O15405 576 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-227ENST00000458564 ASMTLO95671 621 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 PRLP01236 227 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 C9P02748 559 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 ATP1A1P05023 1023 aaKnown RBP10.32□□□□□ -0.76
HDLBP-227ENST00000458564 GPR89BP0CG08 455 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 TCN2P20062 427 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 CDK11BP21127 795 aaKnown RBP10.32□□□□□ -0.76
HDLBP-227ENST00000458564 CA4P22748 312 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 GARSP41250 739 aaKnown RBP10.32□□□□□ -0.76
HDLBP-227ENST00000458564 CD97P48960 835 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 CLCNKAP51800 687 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 EPHB1P54762 984 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 UBE2IP63279 158 aaKnown RBP10.32□□□□□ -0.76
HDLBP-227ENST00000458564 GALNT2Q10471 571 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 NFATC2Q13469 925 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 SEPT6Q14141 434 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 PIGHQ14442 188 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-227ENST00000458564 ASIC2Q16515 512 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 TXNRD3NBQ6F5E7 133 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 CHST15Q7LFX5 561 aaPredicted RBP10.32□□□□□ -0.76
HDLBP-227ENST00000458564 KDELC2Q7Z4H8 507 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 PLXDC1Q8IUK5 500 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 FAM26EQ8N5C1 309 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 MIB2Q96AX9 1013 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 PSMG3-AS1Q96PY0 264 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 SMIM14Q96QK8 99 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 CARD9Q9H257 536 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 HAUS2Q9NVX0 235 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 CPNE7Q9UBL6 633 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 ZNHIT2Q9UHR6 403 aa10.32□□□□□ -0.76
HDLBP-227ENST00000458564 MAN2B2Q9Y2E5 1009 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms