RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 ATP13A5Q4VNC0 1218 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 PRRT3Q5FWE3 981 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 KLHL7Q8IXQ5 586 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 OR13C4Q8NGS5 318 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 VPS35Q96QK1 796 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 SLC32A1Q9H598 525 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 TMPRSS11EQ9UL52 423 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 TMEM98Q9Y2Y6 226 aa27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 OAS3Q9Y6K5 1087 aaKnown RBP27.77■■■□□ 2.04
SMARCC1-203ENST00000454240 GLYATL1P3A0A0U1RQE8 302 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 NEMP2A6NFY4 417 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 MROH6A6NGR9 719 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 SCAMP1O15126 338 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 AQP9O43315 295 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 TUBB4AP04350 444 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 IVLP07476 585 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 CEACAM1P13688 526 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 PSMA3P25788 255 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 POLD2P49005 469 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 PPP1R7Q15435 360 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 CHRNA6Q15825 494 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 FAM151BQ6UXP7 276 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 LMX1AQ8TE12 382 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 PTCD2Q8WV60 388 aaKnown RBP27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 CPT1BQ92523 772 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 GLYATL1Q969I3 302 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 RANBP9Q96S59 729 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 CLPBQ9H078 707 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 CYP4F12Q9HCS2 524 aa27.76■■■□□ 2.03
SMARCC1-203ENST00000454240 AP3B1O00203 1094 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 HADHAP40939 763 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 XIAPP98170 497 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 PTK6Q13882 451 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 DOK6Q6PKX4 331 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 ZNF534Q76KX8 674 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 EID2Q8N6I1 236 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 STYXQ8WUJ0 223 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 NLE1Q9NVX2 485 aaPredicted RBP27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 VPS18Q9P253 973 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 FKBPLQ9UIM3 349 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 MOSPD1Q9UJG1 213 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 APPL1Q9UKG1 709 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 SUFUQ9UMX1 484 aa27.75■■■□□ 2.03
SMARCC1-203ENST00000454240 SLC25A14O95258 325 aaPredicted RBP27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 KCNK5O95279 499 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 CTSEP14091 401 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 ADRA1DP25100 572 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 C1orf61Q13536 156 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 ITGA9Q13797 1035 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 SEPT6Q14141 434 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 ANKRD22Q5VYY1 191 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 LRRC8BQ6P9F7 803 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 SYDE1Q6ZW31 735 aaPredicted RBP27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 FSTL5Q8N475 847 aaPredicted RBP27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 SPATA4Q8NEY3 305 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 DNAJC1Q96KC8 554 aaKnown RBP27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 CARS2Q9HA77 564 aaKnown RBP27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 TRIM39Q9HCM9 518 aa27.74■■■□□ 2.03
SMARCC1-203ENST00000454240 HEATR9A2RTY3 570 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 H7C0S8 307 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 TRIM38O00635 465 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 UGT1A9O60656 530 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 ASMTLO95671 621 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 UGT1A6P19224 532 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 UGT1A1P22309 533 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 UGT1A4P22310 534 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 UGT1A3P35503 534 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 UGT1A5P35504 534 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 NPY2RP49146 381 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 TERF1P54274 439 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 TMPRSS15P98073 1019 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 DR1Q01658 176 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 PEX6Q13608 980 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 LAMB3Q13751 1172 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 CCDC38Q502W7 563 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 PHYKPLQ8IUZ5 450 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 SDR16C5Q8N3Y7 309 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 OR4C6Q8NH72 309 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 ZNF398Q8TD17 642 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 CDC6Q99741 560 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 TMEM168Q9H0V1 697 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 UGT1A7Q9HAW7 530 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 UGT1A10Q9HAW8 530 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 UGT1A8Q9HAW9 530 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 NLGN3Q9NZ94 848 aa27.73■■■□□ 2.03
SMARCC1-203ENST00000454240 CNOT1A5YKK6 2376 aaKnown RBP27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 ZFC3H1O60293 1989 aaKnown RBP27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 LMO7DNF2Z398 122 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 KIF2AO00139 706 aaPredicted RBP27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 TPP1O14773 563 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 GIPC1O14908 333 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 DNAJC6O75061 913 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 SRP72O76094 671 aaKnown RBP27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 PRAMEF1O95521 474 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 CELA2BP08218 269 aaPredicted RBP27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 CA5AP35218 305 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 NOVA1P51513 510 aaKnown RBP27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 SARNPP82979 210 aaKnown RBP27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 ELOCQ15369 112 aa27.72■■■□□ 2.03
SMARCC1-203ENST00000454240 NAT8LQ8N9F0 302 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms