RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 TRIB2Q92519 343 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 TMBIM1Q969X1 311 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 DHRS1Q96LJ7 313 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 UBXN10Q96LJ8 280 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 TMEM74Q96NL1 305 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 TOR3AQ9H497 397 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 SLC52A3Q9NQ40 469 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 PCDHB3Q9Y5E6 796 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 COL1A2P08123 1366 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 H3BMM5 538 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 M0R3G1 203 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 PIP5K1BO14986 540 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 KPNA6O60684 536 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 DNAJB2P25686 324 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 LMO2P25791 158 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 SERPINB1P30740 379 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 SH3BP2P78314 561 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 AASDHQ4L235 1098 aaPredicted RBP17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 ZNF789Q5FWF6 425 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 ZNF678Q5SXM1 525 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 SYPL2Q5VXT5 272 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 C9orf57Q5W0N0 161 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 BLOC1S3Q6QNY0 202 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 ATP6V0D2Q8N8Y2 350 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 NDNFQ8TB73 568 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 SLC2A14Q8TDB8 520 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 VPS33AQ96AX1 596 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 NPY6RQ99463 290 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 FBXO8Q9NRD0 319 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 THG1LQ9NWX6 298 aaKnown RBP17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 SNX5Q9Y5X3 404 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 SHROOM3Q8TF72 1996 aa17.1■□□□□ 0.33
SCUBE2-202ENST00000450649 NUP205Q92621 2012 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 NRCAMQ92823 1304 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 NDUFS2O75306 463 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 CAPN15O75808 1086 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 CES1P23141 567 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 HRH2P25021 359 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 KCNC1P48547 511 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 ADIGQ0VDE8 80 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 VASH1Q7L8A9 365 aaPredicted RBP17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 ANKRD49Q8WVL7 239 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 SDR39U1Q9NRG7 319 aaPredicted RBP17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 PPP6CO00743 305 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 MATN4O95460 622 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 AGXTP21549 392 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 NEK2P51955 445 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 ADAM17P78536 824 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 UNC50Q53HI1 259 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 ARMC8Q8IUR7 673 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 PHYKPLQ8IUZ5 450 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 MMAAQ8IVH4 418 aaKnown RBP17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 VAT1Q99536 393 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 HOXD1Q9GZZ0 328 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 ALG9Q9H6U8 611 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 TXNRD2Q9NNW7 524 aa17.09■□□□□ 0.33
SCUBE2-202ENST00000450649 UBXN8O00124 270 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 MAN1A2O60476 641 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 MT-CYBP00156 380 aaPredicted RBP17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 ITIH1P19827 911 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 ALDH4A1P30038 563 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 ADRA1BP35368 520 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 GABARAPL2P60520 117 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 LSM3P62310 102 aaKnown RBP17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 CAMK2BQ13554 666 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 CTU2Q2VPK5 515 aaKnown RBP17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 ADPRMQ3LIE5 342 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 AKAP14Q86UN6 197 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 RIMKLAQ8IXN7 391 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 PPHLN1Q8NEY8 458 aaKnown RBP17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 OR6Q1Q8NGQ2 317 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 GABPB2Q8TAK5 448 aaPredicted RBP17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 TWIST2Q8WVJ9 160 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 TBL1YQ9BQ87 522 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 CCDC90BQ9GZT6 254 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 FAM118AQ9NWS6 357 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 PMF1-BGLAPU3KQ54 211 aa17.08■□□□□ 0.33
SCUBE2-202ENST00000450649 PTGES3LE9PB15 166 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 I6L893 689 aaPredicted RBP17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 PCNAP12004 261 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 HGFP14210 728 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 NR4A2P43354 598 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 ILF2Q12905 390 aaKnown RBP17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 ACAP2Q15057 778 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 DGUOKQ16854 277 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 COQ5Q5HYK3 327 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 PAGE3Q5JUK9 113 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 FBXO47Q5MNV8 452 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 TMEM236Q5W0B7 351 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 TTC23Q5W5X9 447 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 CLIP4Q8N3C7 705 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 IPMKQ8NFU5 416 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 TUBGCP3Q96CW5 907 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 ALOXE3Q9BYJ1 711 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 PARVBQ9HBI1 364 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 STAP1Q9ULZ2 295 aa17.08■□□□□ 0.32
SCUBE2-202ENST00000450649 ANKRD34BA5PLL1 514 aa17.07■□□□□ 0.32
SCUBE2-202ENST00000450649 GABARAPO95166 117 aa17.07■□□□□ 0.32
SCUBE2-202ENST00000450649 PCMT1P22061 227 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms