RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 SNTA1Q13424 505 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SNAPC2Q13487 334 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IL18Q14116 193 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 STK11Q15831 433 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DUSP6Q16828 381 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FAM187BQ17R55 369 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZSWIM7Q19AV6 140 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 Q3C1V9 767 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 COL13A1Q5TAT6 717 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 METTL11BQ5VVY1 283 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NSMFQ6X4W1 530 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GDPGP1Q6ZNW5 385 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GADL1Q6ZQY3 521 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 C3orf67Q6ZVT6 689 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ATCAYQ86WG3 371 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TBC1D10CQ8IV04 446 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC35F3Q8IY50 421 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GPD1LQ8N335 351 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CCDC24Q8N4L8 307 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 C1orf52Q8N6N3 182 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 MCUQ8NE86 351 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZSWIM2Q8NEG5 633 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ANKK1Q8NFD2 765 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 BEST4Q8NFU0 473 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 OR10Z1Q8NGY1 313 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SLC2A14Q8TDB8 520 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DCAF4Q8WV16 495 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CORO2AQ92828 525 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RNF34Q969K3 372 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FAM120BQ96EK7 910 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 DIRAS2Q96HU8 199 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF778Q96MU6 729 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GAD1Q99259 594 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TBCBQ99426 244 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 S100A13Q99584 98 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TSNAXQ99598 290 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 FUNDC2Q9BWH2 189 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TXLNGYQ9BZA5 131 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZYG11BQ9C0D3 744 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TMEM117Q9H0C3 514 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DPEP3Q9H4B8 488 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IL1RL2Q9HB29 575 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NMRAL1Q9HBL8 299 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 JPH1Q9HDC5 661 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 XPNPEP3Q9NQH7 507 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 SNX15Q9NRS6 342 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CMTM6Q9NX76 183 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GRHL1Q9NZI5 618 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 NFKBIL1Q9UBC1 381 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF70Q9UC06 446 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 FAM198AQ9UFP1 575 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 METRNQ9UJH8 293 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TRHDEQ9UKU6 1024 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MAGED2Q9UNF1 606 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 MEMO1Q9Y316 297 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TRAF6Q9Y4K3 522 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PCDHB5Q9Y5E4 795 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MYH8P13535 1937 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 LOC100506127A0A0U1RQW1 187 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 A0A1W2PPW3 197 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 hCG_1807616A0A1W2PRN6 198 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DCDC2CA8MYV0 355 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PCDHGA12O60330 932 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DNAJB6O75190 326 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ERN1O75460 977 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 RAD17O75943 681 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ANXA9O76027 345 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IPO13O94829 963 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 CCNB2O95067 398 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CST1P01037 141 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ANXA1P04083 346 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PROS1P07225 676 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ANXA5P08758 320 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 BMP2P12643 396 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MLNP12872 115 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RPS2P15880 293 aaKnown RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF182P17025 639 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 HLA-DMAP28067 261 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GCAP28676 217 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ACSL1P33121 698 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 MAP2K3P46734 347 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 STT3AP46977 705 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 HOXA1P49639 335 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 IDH3AP50213 366 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 RAB13P51153 203 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PRELPP51888 382 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 CAPZA1P52907 286 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 PTPN5P54829 565 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 UGT2B15P54855 530 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 EVA1CP58658 441 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 GALK2Q01415 458 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 FAAP100Q0VG06 881 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 DNASE1L3Q13609 305 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 IKBKEQ14164 716 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZNF169Q14929 603 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 PON2Q15165 354 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 ZIK1Q3SY52 487 aaPredicted RBP2.2□□□□□ -2.06
USP53-202ENST00000450251 ATP13A4Q4VNC1 1196 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 COQ5Q5HYK3 327 aa2.2□□□□□ -2.06
USP53-202ENST00000450251 TOR1AIP1Q5JTV8 583 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms