RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 FBXO2Q9UK22 296 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 NUDT5Q9UKK9 219 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 TFR2Q9UP52 801 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 GINS2Q9Y248 185 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLC5A6Q9Y289 635 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 GDAQ9Y2T3 454 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PRELID3BQ9Y3B1 194 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 HEMK1Q9Y5R4 338 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 DMRT1Q9Y5R6 373 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MYH9P35579 1960 aaKnown RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 PFASO15067 1338 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 ASTN2O75129 1339 aaPredicted RBP3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 MROH5Q6ZUA9 1318 aa3.63□□□□□ -1.83
HMGB3P8-201ENST00000449709 LMO7Q8WWI1 1683 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 NALCNQ8IZF0 1738 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 LAMB2P55268 1798 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 A0A1B0GTQ1 180 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 LOC390937A0A1W2PQ73 354 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PQLC2LA1A4F0 135 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZC3H12DA2A288 527 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PMS2P1A4D2B8 440 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 C16orf96A6NNT2 1141 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 MEI4A8MW99 385 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 LEUTXA8MZ59 168 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 KCNJ18B7U540 433 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CLDN25C9JDP6 229 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PGRMC1O00264 195 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PODXLO00592 558 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TNPO2O14787 897 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 FOXN1O15353 648 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 GYG2O15488 501 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 DAPK3O43293 454 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZBTB14O43829 449 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM189A1O60320 539 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSPNO60542 156 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM155BO75949 473 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CLPXO76031 633 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CIAO1O76071 339 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TTLL1O95922 423 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ERBB2P04626 1255 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CYBBP04839 570 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ABHD2P08910 425 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 HOXD4P09016 255 aaPredicted RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CD8BP10966 210 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CDH1P12830 882 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 KRT13P13646 458 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PNLIPP16233 465 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CHMP24386 653 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ACAT1P24752 427 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PIK3R1P27986 724 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PDIA3P30101 505 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 SERPINB5P36952 375 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 STAT1P42224 750 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 GRK6P43250 576 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 NR4A2P43354 598 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 HK3P52790 923 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 NDST2P52849 883 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMBIM6P55061 237 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 C21orf58P58505 322 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 DCDC1P59894 354 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSMC5P62195 406 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 NKX3-2P78367 333 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 IFITM3Q01628 133 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 UBE3AQ05086 875 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF543Q08ER8 600 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 INCA1Q0VD86 236 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TEFQ10587 303 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 BST2Q10589 180 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 NFATC3Q12968 1075 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TRPC3Q13507 836 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CCNIQ14094 377 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ERV3-1Q14264 604 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 KCNJ12Q14500 433 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLC29A2Q14542 456 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 RRP1BQ14684 758 aaKnown RBP3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 HERC3Q15034 1050 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 SPA17Q15506 151 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 CCDC142Q17RM4 750 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PRR16Q569H4 304 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TEX30Q5JUR7 227 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TTC39AQ5SRH9 613 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ARHGEF16Q5VV41 709 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ITPRIPL1Q6GPH6 555 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 UGT3A1Q6NUS8 523 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM180BQ6P0A1 224 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 RHBDF2Q6PJF5 856 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 XKRXQ6PP77 449 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 PAQR3Q6TCH7 311 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ANGPTL8Q6UXH0 198 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMC5Q6UXY8 1006 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM47EQ6ZV65 393 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 BNIPLQ7Z465 357 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ADCK1Q86TW2 530 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ASPGQ86U10 573 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZSWIM9Q86XI8 627 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 DNAAF5Q86Y56 855 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 ERO1BQ86YB8 467 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 SYTL1Q8IYJ3 562 aa3.62□□□□□ -1.83
HMGB3P8-201ENST00000449709 EID3Q8N140 333 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms