RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 GLYATL1Q969I3 302 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 COX14Q96I36 57 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 C16orf45Q96MC5 204 aaPredicted RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 LRRC61Q9BV99 259 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 FRMD8Q9BZ67 464 aaPredicted RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 DDX47Q9H0S4 455 aaKnown RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 TCEAL2Q9H3H9 227 aaPredicted RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 IL26Q9NPH9 171 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 MRPL40Q9NQ50 206 aaKnown RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 EVA1BQ9NVM1 165 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 PIH1D1Q9NWS0 290 aaKnown RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 NLGN3Q9NZ94 848 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 APPL1Q9UKG1 709 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 PNMA8BQ9ULN7 279 aaPredicted RBP13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 TMEM98Q9Y2Y6 226 aa13.92□□□□□ -0.18
GTF3C3-206ENST00000448539 ASCC3Q8N3C0 2202 aaKnown RBP13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 TNFSF14O43557 240 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 CBFA2T3O75081 653 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 IVLP07476 585 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 GNPDA1P46926 289 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 SIM1P81133 766 aaPredicted RBP13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 CDK16Q00536 496 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 TCEA2Q15560 299 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 DEFB133Q30KQ1 61 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 MARK2Q7KZI7 788 aaKnown RBP13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 GALNT13Q8IUC8 556 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 KLHL7Q8IXQ5 586 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 SDR16C5Q8N3Y7 309 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 OR4C6Q8NH72 309 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 DTX3LQ8TDB6 740 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 CNDP2Q96KP4 475 aaKnown RBP13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 VPS18Q9P253 973 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 FKBPLQ9UIM3 349 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 CNOT6Q9ULM6 557 aaKnown RBP13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 SUFUQ9UMX1 484 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 SLC17A4Q9Y2C5 497 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 GPSM3Q9Y4H4 160 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 KCTD3Q9Y597 815 aa13.91□□□□□ -0.18
GTF3C3-206ENST00000448539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 SPAARA0A1B0GVQ0 90 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 HEATR9A2RTY3 570 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 LMO7DNF2Z398 122 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 CCDC188H7C350 402 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 TPP1O14773 563 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 GIPC1O14908 333 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 FANCGO15287 622 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 SIGLEC6O43699 453 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 PRAMEF1O95521 474 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 TPSB2P20231 275 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 POLD2P49005 469 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 ZNF140P52738 457 aaPredicted RBP13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 TMPRSS15P98073 1019 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 DAB2P98082 770 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 ILF3Q12906 894 aaKnown RBP eCLIP13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 MSLNQ13421 630 aaPredicted RBP13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 PTPRCAPQ14761 206 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 TPSAB1Q15661 275 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 CHRNA6Q15825 494 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 TAF8Q7Z7C8 310 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 OR13C4Q8NGS5 318 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 ZNF398Q8TD17 642 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 STYXQ8WUJ0 223 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 GLMNQ92990 594 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 TTC25Q96NG3 672 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 VPS35Q96QK1 796 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 C19orf43Q9BQ61 176 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 CAAP1Q9H8G2 361 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 RMI1Q9H9A7 625 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 TRIM39Q9HCM9 518 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 CASS4Q9NQ75 786 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 ASIC3Q9UHC3 531 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 ZNHIT2Q9UHR6 403 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 SLC30A1Q9Y6M5 507 aa13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 TP53BP1Q12888 1972 aaPredicted RBP13.9□□□□□ -0.18
GTF3C3-206ENST00000448539 CABIN1Q9Y6J0 2220 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 GPR89AB7ZAQ6 455 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 TRIM38O00635 465 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 YY2O15391 372 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 LDB2O43679 373 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 SRP72O76094 671 aaKnown RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 TUBB4AP04350 444 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 GPR89BP0CG08 455 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 ITGALP20701 1170 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 ADRA1DP25100 572 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 ADCY8P40145 1251 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 GRIA1P42261 906 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 DUSP3P51452 185 aaPredicted RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 SESN2P58004 480 aaPredicted RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 PEX6Q13608 980 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 GTF2H3Q13889 308 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 SKIDA1Q1XH10 827 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 ATP13A5Q4VNC0 1218 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 CCDC38Q502W7 563 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 CERCAMQ5T4B2 595 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 KCTD16Q68DU8 428 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 ZCCHC8Q6NZY4 707 aaKnown RBP13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 LVRNQ6Q4G3 990 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 NYAP1Q6ZVC0 841 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 GLRX5Q86SX6 157 aa13.89□□□□□ -0.19
GTF3C3-206ENST00000448539 PPHLN1Q8NEY8 458 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms