RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ITPRIPL1Q6GPH6 555 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 SLC30A9Q6PML9 568 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 TTC30BQ8N4P2 665 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 TTC13Q8NBP0 860 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 DEPDC7Q96QD5 511 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 OR2M4Q96R27 311 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 CDH19Q9H159 772 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 TRABDQ9H4I3 376 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 RAD18Q9NS91 495 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 VPS18Q9P253 973 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 NFKBIL1Q9UBC1 381 aaPredicted RBP12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 R3HDM2Q9Y2K5 976 aaKnown RBP12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 PRKAB1Q9Y478 270 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 PCDHB1Q9Y5F3 818 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 AK5Q9Y6K8 562 aa12.64□□□□□ -0.39
PRPF40A-203ENST00000448428 ANXA9O76027 345 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 SLC25A14O95258 325 aaPredicted RBP12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 CCDC175P0C221 793 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 GLB1P16278 677 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 HLA-DPA1P20036 260 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 PSMB4P28070 264 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 ADRA1AP35348 466 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 HMGCLP35914 325 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 TNNT3P45378 269 aaPredicted RBP12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 CCL7P80098 99 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 CCZ1BP86790 482 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 CCZ1P86791 482 aaPredicted RBP12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 OLIG2Q13516 323 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 HLTFQ14527 1009 aaKnown RBP eCLIP12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 KIF26BQ2KJY2 2108 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 ISXQ2M1V0 245 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 CERCAMQ5T4B2 595 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 RANBP10Q6VN20 620 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 ZNF662Q6ZS27 426 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 C17orf82Q86X59 251 aaPredicted RBP12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 GALNT13Q8IUC8 556 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 TRAM1L1Q8N609 369 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 OR6C4Q8NGE1 309 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 SLC35B2Q8TB61 432 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 ZDHHC1Q8WTX9 485 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 UBE2Q2Q8WVN8 375 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 SPATA13Q96N96 652 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 ZSCAN5AQ9BUG6 496 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 FICDQ9BVA6 458 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 FSD1LQ9BXM9 530 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 TRIM39Q9HCM9 518 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 ARFGAP3Q9NP61 516 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 LZTFL1Q9NQ48 299 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 HACD3Q9P035 362 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 LRIT1Q9P2V4 623 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 ATXN10Q9UBB4 475 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 RNF215Q9Y6U7 377 aa12.63□□□□□ -0.39
PRPF40A-203ENST00000448428 CEP295Q9C0D2 2601 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 A0A1W2PQM1 296 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 C5orf60A6NFR6 353 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 NTN3O00634 580 aaPredicted RBP12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 BUD23O43709 281 aaKnown RBP12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 NUAK1O60285 661 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 USP12O75317 370 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 TCEA3O75764 348 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 ECEL1O95672 775 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 PNLIPP16233 465 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 ACTR1BP42025 376 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 MAZP56270 477 aaKnown RBP12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 ACTR1AP61163 376 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 PRPSAP1Q14558 356 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 ZNF569Q5MCW4 686 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 MEI1Q5TIA1 1274 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 PDPK2PQ6A1A2 396 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 RBM44Q6ZP01 1051 aaKnown RBP12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 CHST15Q7LFX5 561 aaPredicted RBP12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 NAGSQ8N159 534 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 ARL14Q8N4G2 192 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 Q8N9G6 341 aaPredicted RBP12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 FAM71DQ8N9W8 422 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 WDR48Q8TAF3 677 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 BLOC1S5Q8TDH9 187 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 PATE1Q8WXA2 126 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 GLYATL1Q969I3 302 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 NXPE2Q96DL1 559 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 PLEKHG4BQ96PX9 1271 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 APOL2Q9BQE5 337 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 LRRN3Q9H3W5 708 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 RMI1Q9H9A7 625 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 IL26Q9NPH9 171 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 IL17CQ9P0M4 197 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 APPL1Q9UKG1 709 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 TMPRSS11EQ9UL52 423 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 AAR2Q9Y312 384 aaKnown RBP12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 ENTPD2Q9Y5L3 495 aa12.62□□□□□ -0.39
PRPF40A-203ENST00000448428 NUDT21O43809 227 aaKnown RBP12.61□□□□□ -0.39
PRPF40A-203ENST00000448428 ZNF189O75820 626 aaPredicted RBP12.61□□□□□ -0.39
PRPF40A-203ENST00000448428 RPLP0P05388 317 aaKnown RBP12.61□□□□□ -0.39
PRPF40A-203ENST00000448428 ZNF8P17098 575 aaPredicted RBP12.61□□□□□ -0.39
PRPF40A-203ENST00000448428 B4GALNT1Q00973 533 aa12.61□□□□□ -0.39
PRPF40A-203ENST00000448428 MSLNQ13421 630 aaPredicted RBP12.61□□□□□ -0.39
PRPF40A-203ENST00000448428 LRP8Q14114 963 aa12.61□□□□□ -0.39
PRPF40A-203ENST00000448428 SPIDRQ14159 915 aa12.61□□□□□ -0.39
PRPF40A-203ENST00000448428 SPARCL1Q14515 664 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms