RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TSPAN3O60637 253 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 PENKP01210 267 aaPredicted RBP12.85□□□□□ -0.35
SHC1-210ENST00000448116 ATXN1LP0C7T5 689 aaKnown RBP12.85□□□□□ -0.35
SHC1-210ENST00000448116 MTHFD2P13995 350 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 FDXRP22570 491 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 CDK9P50750 372 aaKnown RBP12.85□□□□□ -0.35
SHC1-210ENST00000448116 MERTKQ12866 999 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 PLCL1Q15111 1095 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 SLC14A2Q15849 920 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 OTUD3Q5T2D3 398 aaPredicted RBP12.85□□□□□ -0.35
SHC1-210ENST00000448116 CHST15Q7LFX5 561 aaPredicted RBP12.85□□□□□ -0.35
SHC1-210ENST00000448116 TTC9BQ8N6N2 239 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 GAB3Q8WWW8 586 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 VPS50Q96JG6 964 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 HBEGFQ99075 208 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 EBF1Q9UH73 591 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 TLR6Q9Y2C9 796 aa12.85□□□□□ -0.35
SHC1-210ENST00000448116 BBIP1A8MTZ0 92 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 GIPC1O14908 333 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 NDUFS3O75489 264 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 YAP1P46937 504 aaKnown RBP12.84□□□□□ -0.35
SHC1-210ENST00000448116 TIGD2Q4W5G0 525 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 MORN1Q5T089 497 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 ANKS6Q68DC2 871 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 BORAQ6PGQ7 559 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 HACD2Q6Y1H2 254 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 EPHX4Q8IUS5 362 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 MIPOL1Q8TD10 442 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 TEX37Q96LM6 180 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 KCTD14Q9BQ13 255 aaPredicted RBP12.84□□□□□ -0.35
SHC1-210ENST00000448116 ATP13A1Q9HD20 1204 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 TIMMDC1Q9NPL8 285 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 SLAMF8Q9P0V8 285 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 COMMD10Q9Y6G5 202 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 A0A087WXM4 84 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 FXYD1O00168 92 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 BTN3A1O00481 513 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 CYP11A1P05108 521 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 OR1G1P47890 313 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 LIPEQ05469 1076 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 LPIN1Q14693 890 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 ARTNQ5T4W7 220 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 MSANTD2Q6P1R3 559 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 ERI1Q8IV48 349 aaKnown RBP12.84□□□□□ -0.35
SHC1-210ENST00000448116 ATP6V0D2Q8N8Y2 350 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 HSPBAP1Q96EW2 488 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 UHRF1Q96T88 793 aaPredicted RBP12.84□□□□□ -0.35
SHC1-210ENST00000448116 GPATCH1Q9BRR8 931 aaKnown RBP12.84□□□□□ -0.35
SHC1-210ENST00000448116 SLC7A5P2Q9GIP4 190 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 POLR1EQ9GZS1 481 aaKnown RBP12.84□□□□□ -0.35
SHC1-210ENST00000448116 ARMC1Q9NVT9 282 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 CDC14AQ9UNH5 594 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 SLC27A5Q9Y2P5 690 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 MYLKQ15746 1914 aa12.84□□□□□ -0.35
SHC1-210ENST00000448116 NPEPPSL1A6NEC2 478 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 TNPO2O14787 897 aaKnown RBP12.83□□□□□ -0.35
SHC1-210ENST00000448116 MAGEB3O15480 346 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 RPP40O75818 363 aaKnown RBP12.83□□□□□ -0.35
SHC1-210ENST00000448116 ALDH3B2P48448 385 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 GSK3BP49841 420 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 ATP4BP51164 291 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 UFM1P61960 85 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 ZIK1Q3SY52 487 aaPredicted RBP12.83□□□□□ -0.35
SHC1-210ENST00000448116 SPRYD7Q5W111 196 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 BEND5Q7L4P6 421 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 RALGPS2Q86X27 583 aaPredicted RBP12.83□□□□□ -0.35
SHC1-210ENST00000448116 STAG3L4Q8TBR4 150 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 ZUFSPQ96AP4 578 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 MTG1Q9BT17 334 aaPredicted RBP12.83□□□□□ -0.35
SHC1-210ENST00000448116 MUC3BQ9H195 1237 aa12.83□□□□□ -0.35
SHC1-210ENST00000448116 AQP12BA6NM10 295 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 M0QZQ0 153 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 ATP6V0D1P61421 351 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 TIAL1Q01085 375 aaKnown RBP eCLIP12.83□□□□□ -0.36
SHC1-210ENST00000448116 TAF1CQ15572 869 aaPredicted RBP12.83□□□□□ -0.36
SHC1-210ENST00000448116 PAGE3Q5JUK9 113 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 C8orf82Q6P1X6 216 aaPredicted RBP12.83□□□□□ -0.36
SHC1-210ENST00000448116 PRMT9Q6P2P2 845 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 ZNF280BQ86YH2 543 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 AQP12AQ8IXF9 295 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 SCML4Q8N228 414 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 OR4K2Q8NGD2 314 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 FBXO32Q969P5 355 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 CENPNQ96H22 339 aaPredicted RBP12.83□□□□□ -0.36
SHC1-210ENST00000448116 C1orf74Q96LT6 269 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 GPR21Q99679 349 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 C9orf16Q9BUW7 83 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 ALG2Q9H553 416 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 MARCH2Q9P0N8 246 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 ACTR3BQ9P1U1 418 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 GALPQ9UBC7 116 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 IKZF3Q9UKT9 509 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 NOD1Q9Y239 953 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 FADS3Q9Y5Q0 445 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 A0A0J9YVX5 310 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 A0A0U1RQS6 177 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 EIF3FO00303 357 aaPredicted RBP12.83□□□□□ -0.36
SHC1-210ENST00000448116 ECI2O75521 394 aa12.83□□□□□ -0.36
SHC1-210ENST00000448116 EEF1B2P24534 225 aaKnown RBP12.83□□□□□ -0.36
SHC1-210ENST00000448116 CDKN1CP49918 316 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms